Rudolf T Pillich
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Explore the profile of Rudolf T Pillich including associated specialties, affiliations and a list of published articles.
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18
Citations
140
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Recent Articles
11.
Pillich R, Chen J, Churas C, Fong D, Gyori B, Ideker T, et al.
Bioinformatics
. 2023 Mar;
39(3).
PMID: 36882166
Motivation: The investigation of sets of genes using biological pathways is a common task for researchers and is supported by a wide variety of software tools. This type of analysis...
12.
Ochsner S, Pillich R, Rawool D, Grethe J, McKenna N
iScience
. 2022 Jul;
25(7):104581.
PMID: 35832893
Investigator-generated transcriptomic datasets interrogating circulating immune cell (CIC) gene expression in clinical type 1 diabetes (T1D) have underappreciated re-use value. Here, we repurposed these datasets to create an open science...
13.
Zheng F, Kelly M, Ramms D, Heintschel M, Tao K, Tutuncuoglu B, et al.
Science
. 2021 Sep;
374(6563):eabf3067.
PMID: 34591613
A major goal of cancer research is to understand how mutations distributed across diverse genes affect common cellular systems, including multiprotein complexes and assemblies. Two challenges—how to comprehensively map such...
14.
Pillich R, Chen J, Churas C, Liu S, Ono K, Otasek D, et al.
Curr Protoc
. 2021 Sep;
1(9):e258.
PMID: 34570431
NDEx, the Network Data Exchange (https://www.ndexbio.org) is a web-based resource where users can find, store, share and publish network models of any type and size. NDEx is integrated with Cytoscape,...
15.
Ochsner S, Pillich R, McKenna N
Sci Data
. 2020 Sep;
7(1):314.
PMID: 32963239
Establishing consensus around the transcriptional interface between coronavirus (CoV) infection and human cellular signaling pathways can catalyze the development of novel anti-CoV therapeutics. Here, we used publicly archived transcriptomic datasets...
16.
Ochsner S, Pillich R, McKenna N
bioRxiv
. 2020 Jun;
PMID: 32511379
Establishing consensus around the transcriptional interface between coronavirus (CoV) infection and human cellular signaling pathways can catalyze the development of novel anti-CoV therapeutics. Here, we used publicly archived transcriptomic datasets...
17.
Pillich R, Chen J, Rynkov V, Welker D, Pratt D
Methods Mol Biol
. 2017 Feb;
1558:271-301.
PMID: 28150243
Networks are a powerful and flexible paradigm that facilitate communication and computation about interactions of any type, whether social, economic, or biological. NDEx, the Network Data Exchange, is an online...
18.
Pillich R, Scarsella G, Risuleo G
World J Biol Chem
. 2011 May;
1(9):281-5.
PMID: 21537485
Aim: To explore the possibility that PDX-1 gene is reactivated as a consequence of molecular events that occur during liver regeneration. Methods: Rat hepatocytes were maintained in DMEM-F12, 10% fetal...