Roberto Vera Alvarez
Overview
Explore the profile of Roberto Vera Alvarez including associated specialties, affiliations and a list of published articles.
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Articles
23
Citations
971
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0
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Recent Articles
1.
Griffin P, Mann M, Wang M, Ferreon J, Suess M, Jain A, et al.
Res Sq
. 2024 Nov;
PMID: 39606477
The progesterone receptor (PR) is a steroid-responsive nuclear receptor with two isoforms: PR-A and PR-B. Disruption of PR-A:PR-B signaling is associated with breast cancer through interactions with oncogenic co-regulatory proteins...
2.
Galperin M, Vera Alvarez R, Karamycheva S, Makarova K, Wolf Y, Landsman D, et al.
Nucleic Acids Res
. 2024 Nov;
53(D1):D356-D363.
PMID: 39494517
The Clusters of Orthologous Genes (COG) database, originally created in 1997, has been updated to reflect the constantly growing collection of completely sequenced prokaryotic genomes. This update increased the genome...
3.
Mann M, Wang M, Ferreon J, Suess M, Jain A, Malovannaya A, et al.
bioRxiv
. 2024 Sep;
PMID: 39282295
The progesterone receptor (PR) is a steroid-responsive nuclear receptor with two isoforms: PR-A and PR-B. Disruption of PR-A:PR-B signaling is associated with breast cancer through interactions with oncogenic co-regulatory proteins...
4.
Kashyap M, Karathia H, Kumar D, Vera Alvarez R, Forero-Forero J, Moreno E, et al.
Mol Ther Nucleic Acids
. 2024 Jun;
35(2):102202.
PMID: 38846999
Splicing factor 3b subunit 1 (SF3B1) is the largest subunit and core component of the spliceosome. Inhibition of SF3B1 was associated with an increase in broad intron retention (IR) on...
5.
Vera Alvarez R, Landsman D
Genome Biol
. 2024 Jan;
25(1):12.
PMID: 38191464
The cost and complexity of generating a complete reference genome means that many organisms lack an annotated reference. An alternative is to use a de novo reference transcriptome. This technology...
6.
Camacho C, Boratyn G, Joukov V, Vera Alvarez R, Madden T
BMC Bioinformatics
. 2023 Mar;
24(1):117.
PMID: 36967390
Background: Biomedical researchers use alignments produced by BLAST (Basic Local Alignment Search Tool) to categorize their query sequences. Producing such alignments is an essential bioinformatics task that is well suited...
7.
Camacho C, Boratyn G, Joukov V, Vera Alvarez R, Madden T
bioRxiv
. 2023 Feb;
PMID: 36789435
Background: Biomedical researchers use alignments produced by BLAST (Basic Local Alignment Search Tool) to categorize their query sequences. Producing such alignments is an essential bioinformatics task that is well suited...
8.
Galperin M, Yutin N, Wolf Y, Vera Alvarez R, Koonin E
J Bacteriol
. 2022 May;
204(6):e0007922.
PMID: 35638784
The current classification of the phylum (new name, ) features eight distinct classes, six of which include known spore-forming bacteria. In Bacillus subtilis, sporulation involves up to 500 genes, many...
9.
Galperin M, Wolf Y, Garushyants S, Vera Alvarez R, Koonin E
J Bacteriol
. 2021 Mar;
203(11).
PMID: 33753464
Ribosomal proteins (RPs) are highly conserved across the bacterial and archaeal domains. Although many RPs are essential for survival, genome analysis demonstrates the absence of some RP genes in many...
10.
Bai J, Bandla C, Guo J, Vera Alvarez R, Bai M, Vizcaino J, et al.
J Proteome Res
. 2021 Feb;
20(4):2056-2061.
PMID: 33625229
BioContainers is an open-source project that aims to create, store, and distribute bioinformatics software containers and packages. The BioContainers community has developed a set of guidelines to standardize software containers...