Paolo Marcatili
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Explore the profile of Paolo Marcatili including associated specialties, affiliations and a list of published articles.
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69
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3377
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Recent Articles
1.
Erasmus M, Spector L, Ferrara F, DiNiro R, Pohl T, Perea-Schmittle K, et al.
Nat Biotechnol
. 2024 Nov;
42(11):1637-1642.
PMID: 39496931
No abstract available.
2.
Chailyan A, Marcatili P
Methods Mol Biol
. 2024 Jul;
2821:195-204.
PMID: 38997490
The role of proteins as very effective immunogens for the generation of antibodies is indisputable. Nevertheless, cases in which protein usage for antibody production is not feasible or convenient compelled...
3.
Hoie M, Gade F, Johansen J, Wurtzen C, Winther O, Nielsen M, et al.
Front Immunol
. 2024 Feb;
15:1322712.
PMID: 38390326
Accurate computational identification of B-cell epitopes is crucial for the development of vaccines, therapies, and diagnostic tools. However, current structure-based prediction methods face limitations due to the dependency on experimentally...
4.
Rehfeldt T, Krawczyk K, Gregersen Echers S, Marcatili P, Palczynski P, Rottger R, et al.
Gigascience
. 2023 Nov;
12.
PMID: 37983748
Background: Machine learning (ML) technologies, especially deep learning (DL), have gained increasing attention in predictive mass spectrometry (MS) for enhancing the data-processing pipeline from raw data analysis to end-user predictions...
5.
Christensen L, Hoie M, Bang-Berthelsen C, Marcatili P, Hansen E
Microorganisms
. 2023 Sep;
11(9).
PMID: 37764099
Lactic acid bacteria (LAB) have an extracellular proteolytic system that includes a multi-domain, cell envelope protease (CEP) with a subtilisin homologous protease domain. These CEPs have different proteolytic activities despite...
6.
Varona E, Garcia-Moreno P, Gregersen Echers S, Olsen T, Marcatili P, Guardiola F, et al.
Food Chem
. 2023 Jun;
426:136498.
PMID: 37295051
Bioinformatics tools were used to predict radical scavenging and metal chelating activities of peptides derived from abundant potato, seaweed, microbial, and spinach proteins. The antioxidant activity was evaluated in 5%...
7.
Vujovic M, Marcatili P, Chain B, Kaplinsky J, Andresen T
Commun Biol
. 2023 Mar;
6(1):357.
PMID: 37002292
Changes in the T cell receptor (TCR) repertoires have become important markers for monitoring disease or therapy progression. With the rise of immunotherapy usage in cancer, infectious and autoimmune disease,...
8.
Sternke-Hoffmann R, Pauly T, Norrild R, Hansen J, Tucholski F, Hoie M, et al.
BMC Biol
. 2023 Feb;
21(1):21.
PMID: 36737754
Background: In a range of human disorders such as multiple myeloma (MM), immunoglobulin light chains (IgLCs) can be produced at very high concentrations. This can lead to pathological aggregation and...
9.
Clifford J, Hoie M, Deleuran S, Peters B, Nielsen M, Marcatili P
Protein Sci
. 2022 Nov;
31(12):e4497.
PMID: 36366745
B-cell epitope prediction tools are of great medical and commercial interest due to their practical applications in vaccine development and disease diagnostics. The introduction of protein language models (LMs), trained...
10.
Schaap-Johansen A, Marcatili P
Methods Mol Biol
. 2022 Nov;
2552:475-488.
PMID: 36346610
Mutant Peptide eXtractor and Informer (MuPeXI), by Bjerregaard et al. (Cancer Immunol Immunother CII 66:1123-1130, 2017), is a program which identifies tumor-specific peptides and assesses their potential to be neoepitopes....