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Marijn Berg

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Articles 17
Citations 2331
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Recent Articles
1.
Berg M, Krabbendam L, van der Ploeg E, van Nimwegen M, van der Veer T, Banchero M, et al.
J Cyst Fibros . 2025 Feb; PMID: 39947933
Background: Chronic pulmonary inflammation strongly contributes to respiratory failure and mortality in patients with cystic fibrosis (pwCF). Effective anti-microbial immunity and maintaining lung homeostasis require continuous structural-immune cell communication. Whether...
2.
Berg M, Petoukhov I, van den Ende I, Meyer K, Guryev V, Vonk J, et al.
BMC Genomics . 2023 Nov; 24(1):722. PMID: 38030970
Cell type-specific differential gene expression analyses based on single-cell transcriptome datasets are sensitive to the presence of cell-free mRNA in the droplets containing single cells. This so-called ambient RNA contamination...
3.
Sikkema L, Ramirez-Suastegui C, Strobl D, Gillett T, Zappia L, Madissoon E, et al.
Nat Med . 2023 Jun; 29(6):1563-1577. PMID: 37291214
Single-cell technologies have transformed our understanding of human tissues. Yet, studies typically capture only a limited number of donors and disagree on cell type definitions. Integrating many single-cell datasets can...
4.
Faiz A, Pavlidis S, Kuo C, Rowe A, Hiemstra P, Timens W, et al.
Thorax . 2023 Jan; 78(4):335-343. PMID: 36598042
Rationale: Severe asthma and chronic obstructive pulmonary disease (COPD) share common pathophysiological traits such as relative corticosteroid insensitivity. We recently published three transcriptome-associated clusters (TACs) using hierarchical analysis of the...
5.
van Breugel M, Qi C, Xu Z, Pedersen C, Petoukhov I, Vonk J, et al.
Nat Commun . 2022 Dec; 13(1):7415. PMID: 36456559
Childhood allergic diseases, including asthma, rhinitis and eczema, are prevalent conditions that share strong genetic and environmental components. Diagnosis relies on clinical history and measurements of allergen-specific IgE. We hypothesize...
6.
Qi C, Berg M, Chu X, Timens W, Kole T, van den Berge M, et al.
Allergy . 2022 Jun; 77(12):3663-3666. PMID: 35708915
No abstract available.
7.
Luecken M, Zaragosi L, Madissoon E, Sikkema L, Firsova A, De Domenico E, et al.
Eur Respir J . 2022 Jan; 60(2). PMID: 35086829
The Human Cell Atlas (HCA) consortium aims to establish an atlas of all organs in the healthy human body at single-cell resolution to increase our understanding of basic biological processes...
8.
van de Wetering C, Elko E, Berg M, Schiffers C, Stylianidis V, van den Berge M, et al.
Redox Biol . 2021 May; 43:101995. PMID: 33979767
Our lungs are exposed daily to airborne pollutants, particulate matter, pathogens as well as lung allergens and irritants. Exposure to these substances can lead to inflammatory responses and may induce...
9.
Dwyer D, Ordovas-Montanes J, Allon S, Buchheit K, Vukovic M, Derakhshan T, et al.
Sci Immunol . 2021 Feb; 6(56). PMID: 33637594
Mast cells (MCs) play a pathobiologic role in type 2 (T2) allergic inflammatory diseases of the airway, including asthma and chronic rhinosinusitis with nasal polyposis (CRSwNP). Distinct MC subsets infiltrate...
10.
Pouwels S, Wiersma V, Fokkema I, Berg M, Ten Hacken N, van den Berge M, et al.
Respirology . 2020 Oct; 26(3):233-240. PMID: 33078507
Background And Objective: Cigarette smoking is one of the most prevalent causes of preventable deaths worldwide, leading to chronic diseases, including chronic obstructive pulmonary disease (COPD). Cigarette smoke is known...