Marie A Brunet
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Explore the profile of Marie A Brunet including associated specialties, affiliations and a list of published articles.
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24
Citations
402
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Recent Articles
1.
Wacholder A, Deutsch E, Kok L, van Dinter J, Lee J, Wright J, et al.
bioRxiv
. 2025 Mar;
PMID: 40027765
Thousands of short open reading frames (sORFs) are translated outside of annotated coding sequences. Recent studies have pioneered searching for sORF-encoded microproteins in mass spectrometry (MS)-based proteomics and peptidomics datasets....
2.
Vasylieva V, Arefiev I, Bourassa F, Trifiro F, Brunet M
J Proteome Res
. 2024 Nov;
23(12):5233-5249.
PMID: 39486438
Throughout the past decade, technological advances in genomics and transcriptomics have revealed pervasive translation throughout mammalian genomes. These putative proteins are usually excluded from proteomics analyses, as they are absent...
3.
Deutsch E, Kok L, Mudge J, Ruiz-Orera J, Fierro-Monti I, Sun Z, et al.
bioRxiv
. 2024 Sep;
PMID: 39314370
A major scientific drive is to characterize the protein-coding genome as it provides the primary basis for the study of human health. But the fundamental question remains: what has been...
4.
Shajari E, Gagne D, Malick M, Roy P, Noel J, Gagnon H, et al.
Biomedicines
. 2024 Feb;
12(2).
PMID: 38397935
Inflammatory bowel disease (IBD) flare-ups exhibit symptoms that are similar to other diseases and conditions, making diagnosis and treatment complicated. Currently, the gold standard for diagnosing and monitoring IBD is...
5.
Roy M, Mbous Nguimbus L, Badiane P, Goguen-Couture V, Degrandmaison J, Parent J, et al.
Life Sci Alliance
. 2024 Feb;
7(5).
PMID: 38395460
In overactive human osteoclasts, we previously identified an alternative splicing event in , encoding galectin-8, resulting in decreased expression of the long isoform. Galectin-8, which modulates cell-matrix interactions and functions...
6.
Leblanc S, Yala F, Provencher N, Lucier J, Levesque M, Lapointe X, et al.
Nucleic Acids Res
. 2023 Nov;
52(D1):D522-D528.
PMID: 37956315
The OpenProt proteogenomic resource (https://www.openprot.org/) provides users with a complete and freely accessible set of non-canonical or alternative open reading frames (AltORFs) within the transcriptome of various species, as well...
7.
Guilloy N, Brunet M, Leblanc S, Jacques J, Hardy M, Ehx G, et al.
J Proteome Res
. 2023 Mar;
22(5):1492-1500.
PMID: 36961377
Proteomic diversity in biological samples can be characterized by mass spectrometry (MS)-based proteomics using customized protein databases generated from sets of transcripts previously detected by RNA-seq. This diversity has only...
8.
Khatir I, Brunet M, Meller A, Amiot F, Patel T, Lapointe X, et al.
Cells
. 2023 Feb;
12(4).
PMID: 36831282
During aging, changes in gene expression are associated with a decline in physical and cognitive abilities. Here, we investigate the connection between changes in mRNA and protein expression in the...
9.
St-Germain J, Khan M, Bavykina V, Desmarais R, Scott M, Boissonneault G, et al.
Genes (Basel)
. 2023 Jan;
14(1).
PMID: 36672913
Most pseudogenes are generated when an RNA transcript is reverse-transcribed and integrated into the genome at a new location. Pseudogenes are often considered as an imperfect and silent copy of...
10.
Gagne D, Shajari E, Thibault M, Noel J, Boisvert F, Babakissa C, et al.
Int J Mol Sci
. 2022 Oct;
23(19).
PMID: 36232903
Necrotizing enterocolitis (NEC) is a life-threatening condition for premature infants in neonatal intensive care units. Finding indicators that can predict NEC development before symptoms appear would provide more time to...