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Jonathan M Carlson

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Articles 85
Citations 4437
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Recent Articles
1.
Nolan S, Vignali M, Klinger M, Dines J, Kaplan I, Svejnoha E, et al.
Front Immunol . 2025 Mar; 16:1488851. PMID: 40034696
We describe the establishment and current content of the ImmuneCODE™ database, which includes hundreds of millions of T-cell Receptor (TCR) sequences from over 1,400 subjects exposed to or infected with...
2.
Alves E, Currenti J, Crawford K, Chopra A, Ram R, Barnett L, et al.
Sci Adv . 2025 Feb; 11(7):eadr4238. PMID: 39951541
Developing an effective HIV-1 vaccine is a global health priority, but HIV-1 mutational escape from T cells poses a challenge. While escape from human leukocyte antigen class I (HLA-I)-restricted CD8...
3.
Snyder T, Gittelman R, Klinger M, May D, Osborne E, Taniguchi R, et al.
Front Immunol . 2025 Jan; 15():1488860. PMID: 39840037
Introduction: T cells are involved in the early identification and clearance of viral infections and also support the development of antibodies by B cells. This central role for T cells...
4.
Gittelman R, Lavezzo E, Snyder T, Jabran Zahid H, Carty C, Elyanow R, et al.
JCI Insight . 2022 Apr; 7(10). PMID: 35439174
T cells play a prominent role in orchestrating the immune response to viral diseases, but their role in the clinical presentation and subsequent immunity to SARS-CoV-2 infection remains poorly understood....
5.
Elyanow R, Snyder T, Dalai S, Gittelman R, Boonyaratanakornkit J, Wald A, et al.
JCI Insight . 2022 Apr; 7(10). PMID: 35439166
BACKGROUNDMeasuring the immune response to SARS-CoV-2 enables assessment of past infection and protective immunity. SARS-CoV-2 infection induces humoral and T cell responses, but these responses vary with disease severity and...
6.
Qin K, Boppana S, Carlson J, Fiore-Gartland A, Files J, Zeng J, et al.
J Virol . 2021 Jun; 95(16):e0016021. PMID: 34076482
HIV frequently escapes CD8 T cell responses, leading to the accumulation of viral adaptations. We recently demonstrated that during chronic HIV infection, adapted epitopes can promote maturation of dendritic cells...
7.
Van Egeren D, Novokhodko A, Stoddard M, Tran U, Zetter B, Rogers M, et al.
PLoS One . 2021 Apr; 16(4):e0250780. PMID: 33909660
The spike protein receptor-binding domain (RBD) of SARS-CoV-2 is the molecular target for many vaccines and antibody-based prophylactics aimed at bringing COVID-19 under control. Such a narrow molecular focus raises...
8.
Elyanow R, Snyder T, Dalai S, Gittelman R, Boonyaratanakornkit J, Wald A, et al.
medRxiv . 2021 Apr; PMID: 33791723
Measuring the adaptive immune response to SARS-CoV-2 can enable the assessment of past infection as well as protective immunity and the risk of reinfection. While neutralizing antibody (nAb) titers are...
9.
Connolly S, Carlson J, Schaefer M, Bere A, Kilembe W, Allen S, et al.
AIDS . 2021 Mar; 35(8):1157-1165. PMID: 33710015
Objective S: We investigated the relationship between human leukocyte antigen (HLA)-associated preadaptation for the entire subtype C HIV-1 proteome of the transmitted founder virus and subsequent HIV-1 disease progression in...
10.
Snyder T, Gittelman R, Klinger M, May D, Osborne E, Taniguchi R, et al.
medRxiv . 2020 Aug; PMID: 32793919
T cells are involved in the early identification and clearance of viral infections and also support the development of antibodies by B cells. This central role for T cells makes...