Joachim De Jonghe
Overview
Explore the profile of Joachim De Jonghe including associated specialties, affiliations and a list of published articles.
Author names and details appear as published. Due to indexing inconsistencies, multiple individuals may share a name, and a single author may have variations. MedLuna displays this data as publicly available, without modification or verification
Snapshot
Snapshot
Articles
15
Citations
441
Followers
0
Related Specialties
Related Specialties
Top 10 Co-Authors
Top 10 Co-Authors
Published In
Published In
Affiliations
Affiliations
Soon will be listed here.
Recent Articles
1.
De Jonghe J, Opzoomer J, Vilas-Zornoza A, Nilges B, Crane P, Vicari M, et al.
Cell Genom
. 2024 Dec;
4(12):100723.
PMID: 39667347
Understanding the rapidly evolving landscape of single-cell and spatial omic technologies is crucial for advancing biomedical research and drug development. We provide a living review of both mature and emerging...
2.
De Jonghe J, Opzoomer J, Vilas-Zornoza A, Crane P, Nilges B, Vicari M, et al.
Nat Biotechnol
. 2024 Jul;
42(7):1017-1023.
PMID: 39020213
No abstract available.
3.
Buckley M, Terwagne C, Ganner A, Cubitt L, Brewer R, Kim D, et al.
Nat Genet
. 2024 Jul;
56(7):1446-1455.
PMID: 38969834
To maximize the impact of precision medicine approaches, it is critical to identify genetic variants underlying disease and to accurately quantify their functional effects. A gene exemplifying the challenge of...
4.
De Jonghe J, Kaminski T, Morse D, Tabaka M, Ellermann A, Kohler T, et al.
Nat Commun
. 2023 Aug;
14(1):4788.
PMID: 37553326
Droplet microfluidic methods have massively increased the throughput of single-cell sequencing campaigns. The benefit of scale-up is, however, accompanied by increased background noise when processing challenging samples and the overall...
5.
Kohler T, De Jonghe J, Ellermann A, Yanagida A, Herger M, Slatery E, et al.
Nat Commun
. 2023 Jul;
14(1):4022.
PMID: 37419903
Biomechanical cues are instrumental in guiding embryonic development and cell differentiation. Understanding how these physical stimuli translate into transcriptional programs will provide insight into mechanisms underlying mammalian pre-implantation development. Here,...
6.
Morse D, Michalowski A, Ceribelli M, De Jonghe J, Vias M, Riley D, et al.
Cell Syst
. 2023 Jun;
14(6):464-481.e7.
PMID: 37348462
Single-cell RNA sequencing (scRNA-seq) is a powerful technique for describing cell states. Identifying the spatial arrangement of these states in tissues remains challenging, with the existing methods requiring niche methodologies...
7.
Bao M, Cornwall-Scoones J, Sanchez-Vasquez E, Cox A, Chen D, De Jonghe J, et al.
Nat Cell Biol
. 2023 May;
25(6):917.
PMID: 37221392
No abstract available.
8.
Bao M, Cornwall-Scoones J, Sanchez-Vasquez E, Cox A, Chen D, De Jonghe J, et al.
Nat Cell Biol
. 2022 Sep;
24(9):1341-1349.
PMID: 36100738
Mammalian embryos sequentially differentiate into trophectoderm and an inner cell mass, the latter of which differentiates into primitive endoderm and epiblast. Trophoblast stem (TS), extraembryonic endoderm (XEN) and embryonic stem...
9.
Amadei G, Handford C, Qiu C, De Jonghe J, Greenfeld H, Tran M, et al.
Nature
. 2022 Aug;
610(7930):143-153.
PMID: 36007540
Embryonic stem (ES) cells can undergo many aspects of mammalian embryogenesis in vitro, but their developmental potential is substantially extended by interactions with extraembryonic stem cells, including trophoblast stem (TS)...
10.
Salmen F, De Jonghe J, Kaminski T, Alemany A, Parada G, Verity-Legg J, et al.
Nat Biotechnol
. 2022 Jun;
40(12):1780-1793.
PMID: 35760914
Most methods for single-cell transcriptome sequencing amplify the termini of polyadenylated transcripts, capturing only a small fraction of the total cellular transcriptome. This precludes the detection of many long non-coding,...