Gabriel Rodrigues Alves Margarido
Overview
Explore the profile of Gabriel Rodrigues Alves Margarido including associated specialties, affiliations and a list of published articles.
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18
Citations
149
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Recent Articles
1.
Hohenfeld C, Oliveira S, Ferreira C, Mello V, Margarido G, Passos A, et al.
Sci Rep
. 2024 May;
14(1):10587.
PMID: 38719851
Cassava root-rot incited by soil-borne pathogens is one of the major diseases that reduces root yield. Although the use of resistant cultivars is the most effective method of management, the...
2.
Mello V, Garcia A, Correr F, Hosaka G, Carneiro M, Margarido G
Genet Mol Biol
. 2023 Apr;
46(1):e20220286.
PMID: 37017730
A key procedure for ensuring statistical confidence in differential gene expression analyses is to use biological replicates to compare distinct groups. Biological replicates allow the estimation of the residual variation...
3.
Sharma P, Al-Dossary O, Alsubaie B, Al-Mssallem I, Nath O, Mitter N, et al.
GigaByte
. 2023 Feb;
2021:gigabyte24.
PMID: 36824328
Advances in DNA sequencing have made it easier to sequence and assemble plant genomes. Here, we extend an earlier study, and compare recent methods for long read sequencing and assembly....
4.
Hasan S, Huang L, Liu Q, Perlo V, OKeeffe A, Margarido G, et al.
Rice (N Y)
. 2022 Jun;
15(1):29.
PMID: 35689714
Background: High-throughput next-generation sequencing technologies offer a powerful approach to characterizing the transcriptomes of plants. Long read sequencing has been shown to support the discovery of novel isoforms of transcripts....
5.
Correr F, Furtado A, Garcia A, Henry R, Margarido G
Sci Rep
. 2022 May;
12(1):8778.
PMID: 35610293
Allele-specific expression (ASE) represents differences in the magnitude of expression between alleles of the same gene. This is not straightforward for polyploids, especially autopolyploids, as knowledge about the dose of...
6.
Riano-Pachon D, Espitia-Navarro H, Riascos J, Margarido G
Adv Exp Med Biol
. 2022 Feb;
1346:11-50.
PMID: 35113394
The collection of all transcripts in a cell, a tissue, or an organism is called the transcriptome, or meta-transcriptome when dealing with the transcripts of a community of different organisms....
7.
Rogerio F, Van Oosterhout C, Ciampi-Guillardi M, Correr F, Hosaka G, Cros-Arteil S, et al.
Mol Ecol
. 2022 Jan;
32(10):2428-2442.
PMID: 35076152
Invasions by fungal plant pathogens pose a significant threat to the health of agricultural ecosystems. Despite limited standing genetic variation, many invasive fungal species can adapt and spread rapidly, resulting...
8.
Hosaka G, Correr F, da Silva C, Sforca D, Barreto F, Balsalobre T, et al.
Front Plant Sci
. 2021 Dec;
12:736797.
PMID: 34966397
Multiple genes in sugarcane control sucrose accumulation and the biosynthesis of cell wall components; however, it is unclear how these genes are expressed in its apical culms. To better understand...
9.
Margarido G, Correr F, Furtado A, Botha F, Henry R
Genome Res
. 2021 Dec;
32(2):297-308.
PMID: 34949669
Polyploidy is widespread in plants, allowing the different copies of genes to be expressed differently in a tissue-specific or developmentally specific way. This allele-specific expression (ASE) has been widely reported,...
10.
Zuvanov L, Garcia A, Correr F, Bizarria Jr R, Filho A, da Costa A, et al.
PLoS Comput Biol
. 2021 Nov;
17(11):e1009534.
PMID: 34762646
Computational biology has gained traction as an independent scientific discipline over the last years in South America. However, there is still a growing need for bioscientists, from different backgrounds, with...