Federica Quaglia
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Explore the profile of Federica Quaglia including associated specialties, affiliations and a list of published articles.
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32
Citations
1294
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Recent Articles
11.
Nadendla S, Jackson R, Munro J, Quaglia F, Meszaros B, Olley D, et al.
Nucleic Acids Res
. 2022 Jan;
50(D1):D1515-D1521.
PMID: 34986598
The Evidence and Conclusion Ontology (ECO) is a community resource that provides an ontology of terms used to capture the type of evidence that supports biomedical annotations and assertions. Consistent...
12.
Quaglia F, Meszaros B, Salladini E, Hatos A, Pancsa R, Chemes L, et al.
Nucleic Acids Res
. 2021 Dec;
50(D1):D480-D487.
PMID: 34850135
The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot.org) is the major repository of manually curated annotations of intrinsically disordered proteins and regions from the literature. We report here recent...
13.
Quaglia F, Lazar T, Hatos A, Tompa P, Piovesan D, Tosatto S
Curr Protoc
. 2021 Jul;
1(7):e192.
PMID: 34252246
The Protein Ensemble Database (PED; https://proteinensemble.org/) is the major repository of conformational ensembles of intrinsically disordered proteins (IDPs). Conformational ensembles of IDPs are primarily provided by their authors or occasionally...
14.
Hatos A, Quaglia F, Piovesan D, Tosatto S
Database (Oxford)
. 2021 Apr;
2021.
PMID: 33882120
APICURON is an open and freely accessible resource that tracks and credits the work of biocurators across multiple participating knowledgebases. Biocuration is essential to extract knowledge from research data and...
15.
Lazar T, Martinez-Perez E, Quaglia F, Hatos A, Chemes L, Iserte J, et al.
Nucleic Acids Res
. 2020 Dec;
49(D1):D404-D411.
PMID: 33305318
The Protein Ensemble Database (PED) (https://proteinensemble.org), which holds structural ensembles of intrinsically disordered proteins (IDPs), has been significantly updated and upgraded since its last release in 2016. The new version,...
16.
Piovesan D, Necci M, Escobedo N, Monzon A, Hatos A, Micetic I, et al.
Nucleic Acids Res
. 2020 Nov;
49(D1):D361-D367.
PMID: 33237329
The MobiDB database (URL: https://mobidb.org/) provides predictions and annotations for intrinsically disordered proteins. Here, we report recent developments implemented in MobiDB version 4, regarding the database format, with novel types...
17.
Quaglia F, Hatos A, Piovesan D, Tosatto S
Curr Protoc Bioinformatics
. 2020 Oct;
72(1):e107.
PMID: 33017101
DisProt is the major repository of manually curated data for intrinsically disordered proteins collected from the literature. Although lacking a stable tertiary structure under physiological conditions, intrinsically disordered proteins carry...
18.
Monzon A, Necci M, Quaglia F, Walsh I, Zanotti G, Piovesan D, et al.
Int J Mol Sci
. 2020 Jul;
21(12).
PMID: 32599863
Intrinsically disordered protein regions are commonly defined from missing electron density in X-ray structures. Experimental evidence for long disorder regions (LDRs) of at least 30 residues was so far limited...
19.
Piovesan D, Hatos A, Minervini G, Quaglia F, Monzon A, Tosatto S
PLoS Comput Biol
. 2020 Jun;
16(6):e1007967.
PMID: 32569263
Post-translational modification (PTM) sites have become popular for predictor development. However, with the exception of phosphorylation and a handful of other examples, PTMs suffer from a limited number of available...
20.
Hatos A, Hajdu-Soltesz B, Monzon A, Palopoli N, Alvarez L, Aykac-Fas B, et al.
Nucleic Acids Res
. 2019 Nov;
48(D1):D269-D276.
PMID: 31713636
The Database of Protein Disorder (DisProt, URL: https://disprot.org) provides manually curated annotations of intrinsically disordered proteins from the literature. Here we report recent developments with DisProt (version 8), including the...