Erik Borgstrom
Overview
Explore the profile of Erik Borgstrom including associated specialties, affiliations and a list of published articles.
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12
Citations
262
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Recent Articles
1.
Sounart H, Lazar E, Masarapu Y, Wu J, Varkonyi T, Glasz T, et al.
Genome Biol
. 2023 Oct;
24(1):237.
PMID: 37858234
Technologies to study localized host-pathogen interactions are urgently needed. Here, we present a spatial transcriptomics approach to simultaneously capture host and pathogen transcriptome-wide spatial gene expression information from human formalin-fixed...
2.
Mold J, Modolo L, Hard J, Zamboni M, Larsson A, Stenudd M, et al.
Cell Rep
. 2021 May;
35(8):109174.
PMID: 34038736
The CD8 T cell response to an antigen is composed of many T cell clones with unique T cell receptors, together forming a heterogeneous repertoire of effector and memory cells....
3.
Redin D, Frick T, Aghelpasand H, Kaller M, Borgstrom E, Olsen R, et al.
Sci Rep
. 2019 Dec;
9(1):18116.
PMID: 31792271
The future of human genomics is one that seeks to resolve the entirety of genetic variation through sequencing. The prospect of utilizing genomics for medical purposes require cost-efficient and accurate...
4.
Hard J, Al Hakim E, Kindblom M, Bjorklund A, Sennblad B, Demirci I, et al.
Genome Biol
. 2019 Apr;
20(1):68.
PMID: 30935387
Accurate variant calling and genotyping represent major limiting factors for downstream applications of single-cell genomics. Here, we report Conbase for the identification of somatic mutations in single-cell DNA sequencing data....
5.
Redin D, Borgstrom E, He M, Aghelpasand H, Kaller M, Ahmadian A
Nucleic Acids Res
. 2017 May;
45(13):e125.
PMID: 28525570
Data produced with short-read sequencing technologies result in ambiguous haplotyping and a limited capacity to investigate the full repertoire of biologically relevant forms of genetic variation. The notion of haplotype-resolved...
6.
Borgstrom E, Paterlini M, Mold J, Frisen J, Lundeberg J
PLoS One
. 2017 Feb;
12(2):e0171566.
PMID: 28207771
Background: Whole genome amplification (WGA) is currently a prerequisite for single cell whole genome or exome sequencing. Depending on the method used the rate of artifact formation, allelic dropout and...
7.
Ryden M, Uzunel M, Hard J, Borgstrom E, Mold J, Arner E, et al.
Cell Metab
. 2015 Jul;
22(3):408-17.
PMID: 26190649
Because human white adipocytes display a high turnover throughout adulthood, a continuous supply of precursor cells is required to maintain adipogenesis. Bone marrow (BM)-derived progenitor cells may contribute to mammalian...
8.
Larsson F, Borgstrom E, Luthander C, Dahlstrom A
Lakartidningen
. 2015 Jul;
112.
PMID: 26126011
No abstract available.
9.
Borgstrom E, Redin D, Lundin S, Berglund E, Andersson A, Ahmadian A
Nat Commun
. 2015 Jun;
6:7173.
PMID: 26055759
High-throughput sequencing platforms mainly produce short-read data, resulting in a loss of phasing information for many of the genetic variants analysed. For certain applications, it is vital to know which...
10.
Karlsson M, Dung K, Thi T, Borgstrom E, Jonstam K, Kasstrom L, et al.
Acta Paediatr
. 2012 Sep;
101(12):1225-31.
PMID: 22963670
Aim: Lactate dehydrogenase (LDH) increases in several critical conditions that cause cell damage and could potentially be used for early detection of serious illness in the newborn. Our aim was...