Eric A Stone
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Explore the profile of Eric A Stone including associated specialties, affiliations and a list of published articles.
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Recent Articles
1.
Nguyen D, Henningsen E, Lewis D, Mago R, Sperschneider J, Stone E, et al.
Plant Dis
. 2025 Jan;
PMID: 39763272
Crown rust caused by the basidiomycete fungus f. sp. () results in significant crop losses worldwide. Genetic solutions to protect against this disease require disease resistance gene discovery and introduction...
2.
Hoang D, Dinstag G, Shulman E, Hermida L, Ben-Zvi D, Elis E, et al.
Nat Cancer
. 2024 Jul;
5(9):1305-1317.
PMID: 38961276
Advances in artificial intelligence have paved the way for leveraging hematoxylin and eosin-stained tumor slides for precision oncology. We present ENLIGHT-DeepPT, an indirect two-step approach consisting of (1) DeepPT, a...
3.
Hoang D, Shulman E, Turakulov R, Abdullaev Z, Singh O, Campagnolo E, et al.
Nat Med
. 2024 May;
30(7):1952-1961.
PMID: 38760587
Precision in the diagnosis of diverse central nervous system (CNS) tumor types is crucial for optimal treatment. DNA methylation profiles, which capture the methylation status of thousands of individual CpG...
4.
Hoang D, Dinstag G, Hermida L, Ben-Zvi D, Elis E, Caley K, et al.
Res Sq
. 2023 Oct;
PMID: 37790315
Advances in artificial intelligence have paved the way for leveraging hematoxylin and eosin (H&E)-stained tumor slides for precision oncology. We present ENLIGHT-DeepPT, an approach for predicting response to multiple targeted...
5.
Inferring Species Compositions of Complex Fungal Communities from Long- and Short-Read Sequence Data
Hu Y, Irinyi L, Hoang M, Eenjes T, Graetz A, Stone E, et al.
mBio
. 2022 Apr;
13(2):e0244421.
PMID: 35404122
The kingdom Fungi is highly diverse in morphology and ecosystem function. Yet fungi are challenging to characterize as they can be difficult to culture and morphologically indistinct. Overall, their description...
6.
Duan H, Jones A, Hewitt T, MacKenzie A, Hu Y, Sharp A, et al.
Genome Biol
. 2022 Mar;
23(1):84.
PMID: 35337367
Background: Most animals and plants have more than one set of chromosomes and package these haplotypes into a single nucleus within each cell. In contrast, many fungal species carry multiple...
7.
Sperschneider J, Jones A, Nasim J, Xu B, Jacques S, Zhong C, et al.
BMC Biol
. 2021 Sep;
19(1):203.
PMID: 34526021
Background: Silencing of transposable elements (TEs) is essential for maintaining genome stability. Plants use small RNAs (sRNAs) to direct DNA methylation to TEs (RNA-directed DNA methylation; RdDM). Similar mechanisms of...
8.
Roberts J, Tehrani S, Isom Jr R, Stone E, Brachman M, Garcia V
BMJ Open
. 2020 Oct;
10(10):e039733.
PMID: 33046474
Introduction: Impoverished neighbourhoods and communities of colour often bear the brunt of unintended transit-oriented development (TOD) impacts. These impacts have been known to come in the form of transit-induced gentrification...
9.
Naser-Khdour S, Minh B, Zhang W, Stone E, Lanfear R
Genome Biol Evol
. 2019 Sep;
11(12):3341-3352.
PMID: 31536115
In phylogenetic inference, we commonly use models of substitution which assume that sequence evolution is stationary, reversible, and homogeneous (SRH). Although the use of such models is often criticized, the...
10.
Jiang S, Athanasopoulos V, Ellyard J, Chuah A, Cappello J, Cook A, et al.
Nat Commun
. 2019 May;
10(1):2201.
PMID: 31101814
Systemic lupus erythematosus (SLE) is the prototypic systemic autoimmune disease. It is thought that many common variant gene loci of weak effect act additively to predispose to common autoimmune diseases,...