David Vallenet
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Explore the profile of David Vallenet including associated specialties, affiliations and a list of published articles.
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Articles
78
Citations
4984
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Recent Articles
1.
Mangin C, Benzerara K, Bergot M, Menguy N, Alonso B, Fouteau S, et al.
ISME J
. 2025 Jan;
19(1).
PMID: 39776138
Intracellular calcium carbonate formation has long been associated with a single genus of giant Gammaproteobacteria, Achromatium. However, this biomineralization has recently received increasing attention after being observed in photosynthetic Cyanobacteriota...
2.
Elisee E, Ducrot L, Meheust R, Bastard K, Fossey-Jouenne A, Grogan G, et al.
Nat Commun
. 2024 Jun;
15(1):4933.
PMID: 38858403
Native amine dehydrogenases offer sustainable access to chiral amines, so the search for scaffolds capable of converting more diverse carbonyl compounds is required to reach the full potential of this...
3.
Bremer E, Calteau A, Danchin A, Harwood C, Helmann J, Medigue C, et al.
Microb Biotechnol
. 2023 Apr;
16(6):1203-1231.
PMID: 37002859
The vast majority of genomic sequences are automatically annotated using various software programs. The accuracy of these annotations depends heavily on the very few manual annotation efforts that combine verified...
4.
Jabeur R, Guyon V, Toth S, Pereira A, Huynh M, Selmani Z, et al.
PLoS One
. 2023 Feb;
18(2):e0267220.
PMID: 36800363
The western corn rootworm (WCR) Diabrotica virgifera virgifera (Coleoptera: Chrysomelidae) remains one of the economically most important pests of maize (Zea mays) due to its adaptive capabilities to pest management...
5.
Roche D, Calteau A, Vallenet D
Methods Mol Biol
. 2022 Dec;
2605:241-270.
PMID: 36520398
Large-scale genome sequencing and the increasingly massive use of high-throughput approaches produce a vast amount of new information that completely transforms our understanding of thousands of microbial species occurring in...
6.
Monteil C, Vallenet D, Schuler D, Lefevre C
Proc Natl Acad Sci U S A
. 2022 Aug;
119(39):e2208648119.
PMID: 36037393
No abstract available.
7.
de Crecy-Lagard V, Amorin de Hegedus R, Arighi C, Babor J, Bateman A, Blaby I, et al.
Database (Oxford)
. 2022 Aug;
2022.
PMID: 35961013
Over the last 25 years, biology has entered the genomic era and is becoming a science of 'big data'. Most interpretations of genomic analyses rely on accurate functional annotations of...
8.
Fouteau S, Bui Van V, Rouy Z, Beraud M, Cruaud C, Cayol J, et al.
Microbiol Resour Announc
. 2022 Jun;
11(7):e0013222.
PMID: 35758722
We report the complete genome sequence of sp. strain 8C15b, isolated from bank sediments of Haiphong Bay, Vietnam. The genome includes a 3,628,320-bp circular chromosome and a plasmid of 38,213 ...
9.
Gautreau G, Bazin A, Gachet M, Planel R, Burlot L, Dubois M, et al.
PLoS Comput Biol
. 2021 Dec;
17(12):e1009687.
PMID: 34890406
[This corrects the article DOI: 10.1371/journal.pcbi.1007732.].
10.
Joly P, Calteau A, Wauquier A, Dumas R, Beuvin M, Vallenet D, et al.
Microorganisms
. 2021 Sep;
9(9).
PMID: 34576819
Agriculture is in need of alternative products to conventional phytopharmaceutical treatments from chemical industry. One solution is the use of natural microorganisms with beneficial properties to ensure crop yields and...