David Osumi-Sutherland
Overview
Explore the profile of David Osumi-Sutherland including associated specialties, affiliations and a list of published articles.
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48
Citations
2998
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Recent Articles
1.
Matentzoglu N, Bello S, Stefancsik R, Alghamdi S, Anagnostopoulos A, Balhoff J, et al.
Genetics
. 2025 Mar;
PMID: 40048704
Phenotypic data are critical for understanding biological mechanisms and consequences of genomic variation, and are pivotal for clinical use cases such as disease diagnostics and treatment development. For over a...
2.
Caron A, Puig-Barbe A, Quardokus E, Balhoff J, Belfiore J, Chipampe N, et al.
bioRxiv
. 2025 Jan;
PMID: 39763856
Annotation with widely used, well-structured ontologies, combined with the use of ontology-aware software tools, ensures data and analyses are Findable, Accessible, Interoperable and Reusable (FAIR). Standardized terms with synonyms support...
3.
Toro S, Anagnostopoulos A, Bello S, Blumberg K, Cameron R, Carmody L, et al.
J Biomed Semantics
. 2024 Oct;
15(1):19.
PMID: 39415214
Background: Ontologies are fundamental components of informatics infrastructure in domains such as biomedical, environmental, and food sciences, representing consensus knowledge in an accurate and computable form. However, their construction and...
4.
Matentzoglu N, Bello S, Stefancsik R, Alghamdi S, Anagnostopoulos A, Balhoff J, et al.
bioRxiv
. 2024 Sep;
PMID: 39345458
Phenotypic data are critical for understanding biological mechanisms and consequences of genomic variation, and are pivotal for clinical use cases such as disease diagnostics and treatment development. For over a...
5.
Bridges Y, de Souza V, Cortes K, Haendel M, Harris N, Korn D, et al.
bioRxiv
. 2024 Jun;
PMID: 38915571
Background: Computational approaches to support rare disease diagnosis are challenging to build, requiring the integration of complex data types such as ontologies, gene-to-phenotype associations, and cross-species data into variant and...
6.
Putman T, Schaper K, Matentzoglu N, Rubinetti V, Alquaddoomi F, Cox C, et al.
Nucleic Acids Res
. 2023 Nov;
52(D1):D938-D949.
PMID: 38000386
Bridging the gap between genetic variations, environmental determinants, and phenotypic outcomes is critical for supporting clinical diagnosis and understanding mechanisms of diseases. It requires integrating open data at a global...
7.
George N, Fexova S, Fuentes A, Madrigal P, Bi Y, Iqbal H, et al.
Nucleic Acids Res
. 2023 Nov;
52(D1):D107-D114.
PMID: 37992296
Expression Atlas (www.ebi.ac.uk/gxa) and its newest counterpart the Single Cell Expression Atlas (www.ebi.ac.uk/gxa/sc) are EMBL-EBI's knowledgebases for gene and protein expression and localisation in bulk and at single cell level....
8.
Hawrylycz M, Martone M, Ascoli G, Bjaalie J, Dong H, Ghosh S, et al.
PLoS Biol
. 2023 Jun;
21(6):e3002133.
PMID: 37390046
Characterizing cellular diversity at different levels of biological organization and across data modalities is a prerequisite to understanding the function of cell types in the brain. Classification of neurons is...
9.
Tan S, Kir H, Aevermann B, Gillespie T, Harris N, Hawrylycz M, et al.
Sci Data
. 2023 Apr;
10(1):246.
PMID: 37117232
No abstract available.
10.
Giron J, Tarasov S, Gonzalez Montana L, Matentzoglu N, Smith A, Koch M, et al.
Syst Biol
. 2023 Apr;
72(5):1084-1100.
PMID: 37094905
The spectacular radiation of insects has produced a stunning diversity of phenotypes. During the past 250 years, research on insect systematics has generated hundreds of terms for naming and comparing...