David Osumi-Sutherland
Overview
Explore the profile of David Osumi-Sutherland including associated specialties, affiliations and a list of published articles.
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48
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2998
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Recent Articles
11.
Stefancsik R, Balhoff J, Balk M, Ball R, Bello S, Caron A, et al.
Mamm Genome
. 2023 Apr;
34(3):364-378.
PMID: 37076585
Existing phenotype ontologies were originally developed to represent phenotypes that manifest as a character state in relation to a wild-type or other reference. However, these do not include the phenotypic...
12.
Herr 2nd B, Hardi J, Quardokus E, Bueckle A, Chen L, Wang F, et al.
Sci Data
. 2023 Mar;
10(1):171.
PMID: 36973309
The Human Reference Atlas (HRA) is defined as a comprehensive, three-dimensional (3D) atlas of all the cells in the healthy human body. It is compiled by an international team of...
13.
Court R, Costa M, Pilgrim C, Millburn G, Holmes A, McLachlan A, et al.
Front Physiol
. 2023 Feb;
14:1076533.
PMID: 36776967
As a model organism, is uniquely placed to contribute to our understanding of how brains control complex behavior. Not only does it have complex adaptive behaviors, but also a uniquely...
14.
Stefancsik R, Balhoff J, Balk M, Ball R, Bello S, Caron A, et al.
bioRxiv
. 2023 Feb;
PMID: 36747660
Existing phenotype ontologies were originally developed to represent phenotypes that manifest as a character state in relation to a wild-type or other reference. However, these do not include the phenotypic...
15.
Tan S, Kir H, Aevermann B, Gillespie T, Harris N, Hawrylycz M, et al.
Sci Data
. 2023 Jan;
10(1):50.
PMID: 36693887
Large-scale single-cell 'omics profiling is being used to define a complete catalogue of brain cell types, something that traditional methods struggle with due to the diversity and complexity of the...
16.
Caucheteur D, Pendlington Z, Roncaglia P, Gobeill J, Mottin L, Matentzoglu N, et al.
Bioinformatics
. 2022 Dec;
39(1).
PMID: 36511598
Motivation: Since early 2020, the coronavirus disease 2019 (COVID-19) pandemic has confronted the biomedical community with an unprecedented challenge. The rapid spread of COVID-19 and ease of transmission seen worldwide...
17.
Sollis E, Mosaku A, Abid A, Buniello A, Cerezo M, Gil L, et al.
Nucleic Acids Res
. 2022 Nov;
51(D1):D977-D985.
PMID: 36350656
The NHGRI-EBI GWAS Catalog (www.ebi.ac.uk/gwas) is a FAIR knowledgebase providing detailed, structured, standardised and interoperable genome-wide association study (GWAS) data to >200 000 users per year from academic research, healthcare...
18.
Matentzoglu N, Goutte-Gattat D, Tan S, Balhoff J, Carbon S, Caron A, et al.
Database (Oxford)
. 2022 Oct;
2022.
PMID: 36208225
Similar to managing software packages, managing the ontology life cycle involves multiple complex workflows such as preparing releases, continuous quality control checking and dependency management. To manage these processes, a...
19.
Matentzoglu N, Balhoff J, Bello S, Bizon C, Brush M, Callahan T, et al.
Database (Oxford)
. 2022 May;
2022.
PMID: 35616100
Despite progress in the development of standards for describing and exchanging scientific information, the lack of easy-to-use standards for mapping between different representations of the same or similar objects in...
20.
Fisher M, Segerdell E, Matentzoglu N, Nenni M, Fortriede J, Chu S, et al.
BMC Bioinformatics
. 2022 Mar;
23(1):99.
PMID: 35317743
Background: Ontologies of precisely defined, controlled vocabularies are essential to curate the results of biological experiments such that the data are machine searchable, can be computationally analyzed, and are interoperable...