Daniel J Macqueen
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Explore the profile of Daniel J Macqueen including associated specialties, affiliations and a list of published articles.
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66
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1369
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Recent Articles
1.
Daniels R, Taylor R, Robledo D, Macqueen D
Rev Aquac
. 2024 Mar;
15(4):1618-1637.
PMID: 38505116
Single cell genomics encompasses a suite of rapidly maturing technologies that measure the molecular profiles of individual cells within target samples. These approaches provide a large up-step in biological information...
2.
Andresen A, Taylor R, Grimholt U, Daniels R, Sun J, Dobie R, et al.
Fish Shellfish Immunol
. 2024 Jan;
146:109357.
PMID: 38181891
Single-cell transcriptomics is the current gold standard for global gene expression profiling, not only in mammals and model species, but also in non-model fish species. This is a rapidly expanding...
3.
Sun J, Daniels R, Balic A, Andresen A, Bjorgen H, Dobie R, et al.
Fish Shellfish Immunol
. 2024 Jan;
145:109358.
PMID: 38176627
The spleen is a conserved secondary lymphoid organ that emerged in parallel to adaptive immunity in early jawed vertebrates. Recent studies have applied single cell transcriptomics to reveal the cellular...
4.
Daniels R, Taylor R, Dobie R, Salisbury S, Furniss J, Clark E, et al.
PLoS One
. 2023 Sep;
18(9):e0285020.
PMID: 37676875
The use of single cell sequencing technologies has exploded over recent years, and is now commonly used in many non-model species. Sequencing nuclei instead of whole cells has become increasingly...
5.
Matz H, Taylor R, Redmond A, Hill T, Daniels R, Beltran M, et al.
Cell Rep
. 2023 Jun;
42(7):112664.
PMID: 37342909
The absence of germinal centers (GCs) in cartilaginous fishes lies at odds with data showing that nurse sharks can produce robust antigen-specific responses and affinity mature their B cell repertoires....
6.
Clark T, Naseer S, Gundappa M, Laurent A, Perquis A, Collet B, et al.
Genomics
. 2023 Jun;
115(4):110663.
PMID: 37286012
Antiviral innate immunity is orchestrated by the interferon system, which appeared in ancestors of jawed vertebrates. Interferon upregulation induces hundreds of interferon-stimulated-genes (ISGs) with effector or regulatory functions. Here we...
7.
Redmond A, Casey D, Gundappa M, Macqueen D, McLysaght A
Nat Commun
. 2023 May;
14(1):2879.
PMID: 37208359
Whole genome duplication (WGD) is a dramatic evolutionary event generating many new genes and which may play a role in survival through mass extinctions. Paddlefish and sturgeon are sister lineages...
8.
Gundappa M, Penaloza C, Regan T, Boutet I, Tanguy A, Houston R, et al.
Evol Appl
. 2022 Nov;
15(11):1713-1729.
PMID: 36426132
The European flat oyster ( L.) is a bivalve naturally distributed across Europe, which was an integral part of human diets for centuries, until anthropogenic activities and disease outbreaks severely...
9.
Bean T, Tanguy A, Penaloza C, Gundappa M, Boutet I, Houston R, et al.
Evol Appl
. 2022 Nov;
15(11):1709-1712.
PMID: 36426118
This volume of Evolutionary Applications sees the publication of two genomes for the European native flat oyster , a species of significant evolutionary, ecological and commercial value. Each is a...
10.
Sambade I, Casanova A, Blanco A, Gundappa M, Bean T, Macqueen D, et al.
Evol Appl
. 2022 Oct;
15(9):1408-1422.
PMID: 36187184
European flat oyster () is an ecologically and economically important marine bivalve, that has been severely affected by the intracellular parasite . In this study, a flat oyster SNP array...