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Christian Quast

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Articles 25
Citations 19856
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Recent Articles
1.
Waterhouse R, Adam-Blondon A, Agosti D, Baldrian P, Balech B, Corre E, et al.
F1000Res . 2022 Aug; 10. PMID: 35999898
Threats to global biodiversity are increasingly recognised by scientists and the public as a critical challenge. Molecular sequencing technologies offer means to catalogue, explore, and monitor the richness and biogeography...
2.
Wiegand S, Rast P, Kallscheuer N, Jogler M, Heuer A, Boedeker C, et al.
Microorganisms . 2021 Aug; 9(7). PMID: 34361930
Planctomycetes are bacteria that were long thought to be unculturable, of low abundance, and therefore neglectable in the environment. This view changed in recent years, after it was shown that...
3.
Mayer G, Muller W, Schork K, Uszkoreit J, Weidemann A, Wittig U, et al.
Brief Bioinform . 2021 Feb; 22(5). PMID: 33589928
This article describes some use case studies and self-assessments of FAIR status of de.NBI services to illustrate the challenges and requirements for the definition of the needs of adhering to...
4.
Kallscheuer N, Rast P, Jogler M, Wiegand S, Kohn T, Boedeker C, et al.
Environ Microbiol . 2020 Dec; 23(3):1379-1396. PMID: 33331109
Waterbodies such as lakes and ponds are fragile environments affected by human influences. Suitable conditions can result in massive growth of phototrophs, commonly referred to as phytoplankton blooms. Such events...
5.
Reintjes G, Tegetmeyer H, Burgisser M, Orlic S, Tews I, Zubkov M, et al.
Appl Environ Microbiol . 2019 May; 85(14). PMID: 31076426
The South Pacific Gyre (SPG) covers 10% of the ocean's surface and is often regarded as a marine biological desert. To gain an on-site overview of the remote, ultraoligotrophic microbial...
6.
Mayer G, Quast C, Felden J, Lange M, Prinz M, Puhler A, et al.
Brief Bioinform . 2017 Nov; 20(4):1215-1221. PMID: 29092005
Sustainable noncommercial bioinformatics infrastructures are a prerequisite to use and take advantage of the potential of big data analysis for research and economy. Consequently, funders, universities and institutes as well...
7.
Beccati A, Gerken J, Quast C, Yilmaz P, Glockner F
BMC Bioinformatics . 2017 Oct; 18(1):433. PMID: 28964270
Background: Phylogenetic trees are an important tool to study the evolutionary relationships among organisms. The huge amount of available taxa poses difficulties in their interactive visualization. This hampers the interaction...
8.
Glockner F, Yilmaz P, Quast C, Gerken J, Beccati A, Ciuprina A, et al.
J Biotechnol . 2017 Jun; 261:169-176. PMID: 28648396
SILVA (lat. forest) is a comprehensive web resource, providing services around up to date, high-quality datasets of aligned ribosomal RNA gene (rDNA) sequences from the Bacteria, Archaea, and Eukaryota domains....
9.
Berney C, Ciuprina A, Bender S, Brodie J, Edgcomb V, Kim E, et al.
J Eukaryot Microbiol . 2017 Mar; 64(3):407-411. PMID: 28337822
Universal taxonomic frameworks have been critical tools to structure the fields of botany, zoology, mycology, and bacteriology as well as their large research communities. Animals, plants, and fungi have relatively...
10.
Meyer J, Baskaran P, Quast C, Susoy V, Rodelsperger C, Glockner F, et al.
Environ Microbiol . 2017 Feb; 19(4):1476-1489. PMID: 28198090
Insects and nematodes represent the most species-rich animal taxa and they occur together in a variety of associations. Necromenic nematodes of the genus Pristionchus are found on scarab beetles with...