Christian J Stoeckert Jr
Overview
Explore the profile of Christian J Stoeckert Jr including associated specialties, affiliations and a list of published articles.
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92
Citations
10165
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Recent Articles
1.
Greenfest-Allen E, Valladares O, Kuksa P, Gangadharan P, Lee W, Cifello J, et al.
Alzheimers Dement
. 2023 Oct;
20(2):1123-1136.
PMID: 37881831
Introduction: The National Institute on Aging Genetics of Alzheimer's Disease Data Storage Site Alzheimer's Genomics Database (GenomicsDB) is a public knowledge base of Alzheimer's disease (AD) genetic datasets and genomic...
2.
Jackson R, Matentzoglu N, Overton J, Vita R, Balhoff J, Buttigieg P, et al.
Database (Oxford)
. 2021 Oct;
2021.
PMID: 34697637
Biological ontologies are used to organize, curate and interpret the vast quantities of data arising from biological experiments. While this works well when using a single ontology, integrating multiple ontologies...
3.
Freedman H, Williams H, Miller M, Birtwell D, Mowery D, Stoeckert Jr C
J Biomed Inform
. 2021 Aug;
112S:100086.
PMID: 34417005
Standardizing clinical information in a semantically rich data model is useful for promoting interoperability and facilitating high quality research. Semantic Web technologies such as Resource Description Framework can be utilized...
4.
Vita R, Zheng J, Jackson R, Dooley D, Overton J, Miller M, et al.
Database (Oxford)
. 2021 Jul;
2021.
PMID: 34244718
The Ontology for Biomedical Investigations (OBI) underwent a focused review of assay term annotations, logic and hierarchy with a goal to improve and standardize these terms. As a result, inconsistencies...
5.
Sanavia T, Huang C, Manduchi E, Xu Y, Dadi P, Potter L, et al.
Front Cell Dev Biol
. 2021 May;
9:648791.
PMID: 34017831
Newly differentiated pancreatic β cells lack proper insulin secretion profiles of mature functional β cells. The global gene expression differences between paired immature and mature β cells have been studied,...
6.
Osipovich A, Dudek K, Greenfest-Allen E, Cartailler J, Manduchi E, Potter Case L, et al.
Development
. 2021 Mar;
148(6).
PMID: 33653874
To gain a deeper understanding of pancreatic β-cell development, we used iterative weighted gene correlation network analysis to calculate a gene co-expression network (GCN) from 11 temporally and genetically defined...
7.
Basenko E, Pulman J, Shanmugasundram A, Harb O, Crouch K, Starns D, et al.
J Fungi (Basel)
. 2018 Aug;
4(1).
PMID: 30152809
FungiDB (fungidb.org) is a free online resource for data mining and functional genomics analysis for fungal and oomycete species. FungiDB is part of the Eukaryotic Pathogen Genomics Database Resource (EuPathDB,...
8.
Huang C, Walker E, Dadi P, Hu R, Xu Y, Zhang W, et al.
Dev Cell
. 2018 Apr;
45(3):347-361.e5.
PMID: 29656931
Islet β cells from newborn mammals exhibit high basal insulin secretion and poor glucose-stimulated insulin secretion (GSIS). Here we show that β cells of newborns secrete more insulin than adults...
9.
Oliveira F, Brestelli J, Cade S, Zheng J, Iodice J, Fischer S, et al.
Nucleic Acids Res
. 2017 Nov;
46(D1):D684-D691.
PMID: 29106667
MicrobiomeDB (http://microbiomeDB.org) is a data discovery and analysis platform that empowers researchers to fully leverage experimental variables to interrogate microbiome datasets. MicrobiomeDB was developed in collaboration with the Eukaryotic Pathogens...
10.
McCormick M, Manduchi E, Witschey W, Gorman R, Gorman 3rd J, Jiang Y, et al.
J Biomech
. 2016 Dec;
50:11-19.
PMID: 27916240
Despite substantial evidence for the central role of hemodynamic shear stress in the functional integrity of vascular endothelial cells, hemodynamic and molecular regulation of the endocardial endothelium lining the heart...