Chenxu Pan
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Explore the profile of Chenxu Pan including associated specialties, affiliations and a list of published articles.
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4
Citations
98
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Recent Articles
1.
Pan C, Reinert K
Genome Biol
. 2024 Jun;
25(1):155.
PMID: 38872200
Advances in sequencing technology have facilitated population-scale long-read structural variant (SV) detection. Arguably, one of the main challenges in population-scale analysis is developing effective computational pipelines. Here, we present a...
2.
Pan C, Reinert K
Bioinformatics
. 2024 Jan;
40(2).
PMID: 38269626
Motivation: The minimizer concept is a data structure for sequence sketching. The standard canonical minimizer selects a subset of k-mers from the given DNA sequence by comparing the forward and...
3.
Pan C, Rahn R, Heller D, Reinert K
Brief Bioinform
. 2023 Mar;
24(2).
PMID: 36869850
Alignment is the cornerstone of many long-read pipelines and plays an essential role in resolving structural variants (SVs). However, forced alignments of SVs embedded in long reads, inflexibility of integrating...
4.
Wang X, Pan C, Gong J, Liu X, Li H
J Chem Inf Model
. 2016 May;
56(6):1175-83.
PMID: 27187084
PharmMapper is a web server for drug target identification by reversed pharmacophore matching the query compound against an annotated pharmacophore model database, which provides a computational polypharmacology prediction approach for...