Alexandre Rossi Paschoal
Overview
Explore the profile of Alexandre Rossi Paschoal including associated specialties, affiliations and a list of published articles.
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Articles
27
Citations
250
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0
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Recent Articles
1.
Adjeroh D, Zhou X, Paschoal A, Dimitrova N, Derevyanchuk E, Shkurat T, et al.
Noncoding RNA
. 2024 Aug;
10(4).
PMID: 39195572
This is a mini-review capturing the views and opinions of selected participants at the 2021 IEEE BIBM 3rd Annual LncRNA Workshop, held in Dubai, UAE. The views and opinions are...
2.
Sanita Lima M, Silva Domingues D, Paschoal A, Smith D
Physiol Plant
. 2024 Jul;
176(4):e14418.
PMID: 39004808
Plant organelle transcription has been studied for decades. As techniques advanced, so did the fields of mitochondrial and plastid transcriptomics. The current view is that organelle genomes are pervasively transcribed,...
3.
Sanita Lima M, Silva Domingues D, Paschoal A, Smith D
Brief Funct Genomics
. 2024 Jun;
23(6):695-701.
PMID: 38880995
40 years ago, organelle genomes were assumed to be streamlined and, perhaps, unexciting remnants of their prokaryotic past. However, the field of organelle genomics has exposed an unparallel diversity in...
4.
Salojarvi J, Rambani A, Yu Z, Guyot R, Strickler S, Lepelley M, et al.
Nat Genet
. 2024 Apr;
56(4):721-731.
PMID: 38622339
Coffea arabica, an allotetraploid hybrid of Coffea eugenioides and Coffea canephora, is the source of approximately 60% of coffee products worldwide, and its cultivated accessions have undergone several population bottlenecks....
5.
Barbosa D, Oliveira L, Nachtigall P, Valentini Junior R, de Souza N, Paschoal A, et al.
Adv Protein Chem Struct Biol
. 2024 Mar;
139:289-334.
PMID: 38448139
Studies focusing on characterizing circRNAs with the potential to translate into peptides are quickly advancing. It is helping to elucidate the roles played by circRNAs in several biological processes, especially...
6.
Sanita Lima M, Paschoal A, Silva Domingues D, Smith D
Trends Plant Sci
. 2024 Feb;
29(6):626-629.
PMID: 38360479
Plant mitochondrial and plastid genomes typically show pervasive, genome-wide transcription. Little is known, however, about the utility of organelle noncoding RNAs, which often make up most of the transcriptome. Here,...
7.
Correia De Lemos S, Paschoal A, Guyot R, Medema M, Silva Domingues D
Comput Struct Biotechnol J
. 2023 Dec;
23:22-33.
PMID: 38075396
The Rubiaceae plant family, comprising 3 subfamilies and over 13,000 species, is known for producing significant bioactive compounds such as caffeine and monoterpene indole alkaloids. Despite an increase in available...
8.
Orozco-Arias S, Lopez-Murillo L, Candamil-Cortes M, Arias M, Jaimes P, Paschoal A, et al.
Brief Bioinform
. 2022 Dec;
24(1).
PMID: 36502372
LTR-retrotransposons are the most abundant repeat sequences in plant genomes and play an important role in evolution and biodiversity. Their characterization is of great importance to understand their dynamics. However,...
9.
da Silva E, Rebello K, Choi Y, Gregorio V, Paschoal A, Mitreva M, et al.
Pathogens
. 2022 Nov;
11(11).
PMID: 36365024
RNA sequencing (RNA-Seq) and mass-spectrometry-based proteomics data are often integrated in proteogenomic studies to assist in the prediction of eukaryote genome features, such as genes, splicing, single-nucleotide (SNVs), and single-amino-acid...
10.
Pedro D, Amorim T, Varani A, Guyot R, Silva Domingues D, Paschoal A
F1000Res
. 2022 Jan;
10:1194.
PMID: 35035898
Advances in genomic sequencing have recently offered vast opportunities for biological exploration, unraveling the evolution and improving our understanding of Earth biodiversity. Due to distinct plant species characteristics in terms...