Alexandre P Marand
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Explore the profile of Alexandre P Marand including associated specialties, affiliations and a list of published articles.
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35
Citations
1198
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Recent Articles
21.
Marand A, Chen Z, Gallavotti A, Schmitz R
Cell
. 2021 May;
184(11):3041-3055.e21.
PMID: 33964211
cis-regulatory elements (CREs) encode the genomic blueprints of spatiotemporal gene expression programs enabling highly specialized cell functions. Using single-cell genomics in six maize organs, we determined the cis- and trans-regulatory...
22.
Noshay J, Marand A, Anderson S, Zhou P, Mejia Guerra M, Lu Z, et al.
Genetics
. 2021 Mar;
217(1):1-13.
PMID: 33683350
Transposable elements (TEs) have the potential to create regulatory variation both through the disruption of existing DNA regulatory elements and through the creation of novel DNA regulatory elements. In a...
23.
Crisp P, Marand A, Noshay J, Zhou P, Lu Z, Schmitz R, et al.
Proc Natl Acad Sci U S A
. 2020 Sep;
117(38):23991-24000.
PMID: 32879011
The genomic sequences of crops continue to be produced at a frenetic pace. It remains challenging to develop complete annotations of functional genes and regulatory elements in these genomes. Chromatin...
24.
Kieft R, Zhang Y, Marand A, Moran J, Bridger R, Wells L, et al.
PLoS Genet
. 2020 Feb;
16(2):e1008390.
PMID: 32084124
Base J, β-D-glucosyl-hydroxymethyluracil, is a modification of thymine DNA base involved in RNA Polymerase (Pol) II transcription termination in kinetoplastid protozoa. Little is understood regarding how specific thymine residues are...
25.
Ricci W, Lu Z, Ji L, Marand A, Ethridge C, Murphy N, et al.
Nat Plants
. 2020 Feb;
6(3):328.
PMID: 32029893
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
26.
Ricci W, Lu Z, Ji L, Marand A, Ethridge C, Murphy N, et al.
Nat Plants
. 2019 Nov;
5(12):1237-1249.
PMID: 31740773
Genetic mapping studies on crops suggest that agronomic traits can be controlled by gene-distal intergenic loci. Despite the biological importance and the potential agronomic utility of these loci, they remain...
27.
Lu Z, Marand A, Ricci W, Ethridge C, Zhang X, Schmitz R
Nat Plants
. 2019 Nov;
5(12):1250-1259.
PMID: 31740772
Chromatin accessibility and modification is a hallmark of regulatory DNA, the study of which led to the discovery of cis-regulatory elements (CREs). Here, we characterize chromatin accessibility, histone modifications and...
28.
Zeng Z, Zhang W, Marand A, Zhu B, Buell C, Jiang J
Genome Biol
. 2019 Jun;
20(1):123.
PMID: 31208436
Background: Cold stress can greatly affect plant growth and development. Plants have developed special systems to respond to and tolerate cold stress. While plant scientists have discovered numerous genes involved...
29.
Marand A, Jansky S, Gage J, Hamernik A, de Leon N, Jiang J
Genetics
. 2019 Mar;
212(1):317-332.
PMID: 30885982
Deconvolution of the genetic architecture underlying yield is critical for understanding bases of genetic gain in species of agronomic importance. To dissect the genetic components of yield in potato, we...
30.
Marand A, Zhao H, Zhang W, Zeng Z, Fang C, Jiang J
Plant Cell
. 2019 Feb;
31(3):645-662.
PMID: 30705136
Recombination plays an integral role in the creation of novel genetic variation in sexually reproducing species. Despite this important role, the determinants and evolution of crossover hotspots have remained poorly...