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Two Distinct Intervening Sequences in Different Ribosomal DNA Repeat Units of Sciara Coprophila

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Specialty Biochemistry
Date 1981 Aug 11
PMID 7279671
Citations 11
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Abstract

We have prepared a partial gene library of sheared DNA from the fungus fly, Sciara coprophila, by dA-T tailing and insertion into pBR322. Two ribosomal DNA clones which differ from the usual ribosomal DNA organization in this organism were studied in detail. Clone pBc 1L-1 has an intervening sequence of 1.4 kb, and clone pBc 6D-6 has an intervening sequence of 0.9 kb. These intervening sequences occur in about the same position in 28S rDNA, but do not appear to share sequence homology with one another. Previously we found that 90% of Sciara ribosomal DNA is homogenous and lacks an intervening sequence, and our present data explains the size heterogeneity found in most of the remaining 10%. We have found no evidence of size heterogeneity in the nontranscribed spacer.

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References
1.
Mandel M, Higa A . Calcium-dependent bacteriophage DNA infection. J Mol Biol. 1970; 53(1):159-62. DOI: 10.1016/0022-2836(70)90051-3. View

2.
Gerbi S . Localization and characterization of the ribosomal RNA cistrons in Sciara coprophila. J Mol Biol. 1971; 58(2):499-511. DOI: 10.1016/0022-2836(71)90367-6. View

3.
Helling R, Goodman H, Boyer H . Analysis of endonuclease R-EcoRI fragments of DNA from lambdoid bacteriophages and other viruses by agarose-gel electrophoresis. J Virol. 1974; 14(5):1235-44. PMC: 355640. DOI: 10.1128/JVI.14.5.1235-1244.1974. View

4.
Wensink P, Finnegan D, Donelson J, Hogness D . A system for mapping DNA sequences in the chromosomes of Drosophila melanogaster. Cell. 1974; 3(4):315-25. DOI: 10.1016/0092-8674(74)90045-2. View

5.
Maniatis T, Jeffrey A, Kleid D . Nucleotide sequence of the rightward operator of phage lambda. Proc Natl Acad Sci U S A. 1975; 72(3):1184-8. PMC: 432491. DOI: 10.1073/pnas.72.3.1184. View