He W, Kirmizialtin S
Biomacromolecules. 2024; 25(8):4819-4830.
PMID: 39011747
PMC: 11323003.
DOI: 10.1021/acs.biomac.4c00192.
Harnett J, Weir S, Michieletto D
Soft Matter. 2024; 20(19):3980-3986.
PMID: 38686506
PMC: 11095498.
DOI: 10.1039/d3sm00957b.
Collette D, Dunlap D, Finzi L
Int J Mol Sci. 2023; 24(24).
PMID: 38139331
PMC: 10744201.
DOI: 10.3390/ijms242417502.
Dannert C, Mardal I, Lale R, Stokke B, Dias R
ACS Omega. 2023; 8(47):44624-44636.
PMID: 38046290
PMC: 10688094.
DOI: 10.1021/acsomega.3c05140.
He W, Qiu X, Kirmizialtin S
J Chem Theory Comput. 2023; 19(19):6827-6838.
PMID: 37728274
PMC: 10569048.
DOI: 10.1021/acs.jctc.3c00520.
Ion-induced changes in DNA gels.
Horkay F, Basser P, Geissler E
Soft Matter. 2023; 19(28):5405-5415.
PMID: 37427607
PMC: 10510426.
DOI: 10.1039/d3sm00666b.
Direct Measurement of Interhelical DNA Repulsion and Attraction by Quantitative Cross-Linking.
Hamilton I, Gebala M, Herschlag D, Russell R
J Am Chem Soc. 2022; 144(4):1718-1728.
PMID: 35073489
PMC: 8815069.
DOI: 10.1021/jacs.1c11122.
A Simple Zn2+ Complex-Based Composite System for Efficient Gene Delivery.
Zhang Z, Zhao Y, Meng X, Zhao D, Zhang D, Wang L
PLoS One. 2016; 11(7):e0158766.
PMID: 27433798
PMC: 4951035.
DOI: 10.1371/journal.pone.0158766.
Coexistence of coil and globule domains within a single confined DNA chain.
Sung B, Leforestier A, Livolant F
Nucleic Acids Res. 2015; 44(3):1421-7.
PMID: 26704970
PMC: 4756835.
DOI: 10.1093/nar/gkv1494.
Crystalline polymorphism induced by charge regulation in ionic membranes.
Leung C, Palmer L, Kewalramani S, Qiao B, Stupp S, Olvera de la Cruz M
Proc Natl Acad Sci U S A. 2013; 110(41):16309-14.
PMID: 24065818
PMC: 3799385.
DOI: 10.1073/pnas.1316150110.
Field Hypothesis on the Self-regulation of Gene Expression.
Yoshikawa K
J Biol Phys. 2013; 28(4):701-12.
PMID: 23345807
PMC: 3456465.
DOI: 10.1023/A:1021251125101.
A universal description for the experimental behavior of salt-(in)dependent oligocation-induced DNA condensation.
Korolev N, Berezhnoy N, Eom K, Tam J, Nordenskiold L
Nucleic Acids Res. 2012; 40(6):2808-21.
PMID: 22563605
PMC: 3729243.
DOI: 10.1093/nar/gks214.
Polymer-monovalent salt-induced DNA compaction studied via single-molecule microfluidic trapping.
Xu W, Muller S
Lab Chip. 2011; 12(3):647-51.
PMID: 22173785
PMC: 3322635.
DOI: 10.1039/c2lc20880f.
Role of amino acid insertions on intermolecular forces between arginine peptide condensed DNA helices: implications for protamine-DNA packaging in sperm.
DeRouchey J, Rau D
J Biol Chem. 2011; 286(49):41985-41992.
PMID: 21994948
PMC: 3234980.
DOI: 10.1074/jbc.M111.295808.
ON-OFF switching of transcriptional activity of large DNA through a conformational transition in cooperation with phospholipid membrane.
Tsuji A, Yoshikawa K
J Am Chem Soc. 2010; 132(35):12464-71.
PMID: 20704293
PMC: 2931404.
DOI: 10.1021/ja105154k.
Visualizing the formation and collapse of DNA toroids.
van den Broek B, Noom M, van Mameren J, Battle C, MacKintosh F, Wuite G
Biophys J. 2010; 98(9):1902-10.
PMID: 20441754
PMC: 2862208.
DOI: 10.1016/j.bpj.2009.12.4334.
A universal description for the experimental behavior of salt-(in)dependent oligocation-induced DNA condensation.
Korolev N, Berezhnoy N, Eom K, Tam J, Nordenskiold L
Nucleic Acids Res. 2009; 37(21):7137-50.
PMID: 19773427
PMC: 2790876.
DOI: 10.1093/nar/gkp683.
Conformational transition of giant DNA in a confined space surrounded by a phospholipid membrane.
Kato A, Shindo E, Sakaue T, Tsuji A, Yoshikawa K
Biophys J. 2009; 97(6):1678-86.
PMID: 19751673
PMC: 2749780.
DOI: 10.1016/j.bpj.2009.06.041.
Loop dependence of the stability and dynamics of nucleic acid hairpins.
Kuznetsov S, Ren C, Woodson S, Ansari A
Nucleic Acids Res. 2007; 36(4):1098-112.
PMID: 18096625
PMC: 2275088.
DOI: 10.1093/nar/gkm1083.
Aggregation and adsorption at the air-water interface of bacteriophage phiX174 single-stranded DNA.
Douarche C, Sikorav J, Goldar A
Biophys J. 2007; 94(1):134-46.
PMID: 17766344
PMC: 2134866.
DOI: 10.1529/biophysj.107.107771.
