Badasyan A, Giacometti A, Podgornik R, Mamasakhlisov Y, Morozov V
Eur Phys J E Soft Matter. 2013; 36(5):46.
PMID: 23665762
DOI: 10.1140/epje/i2013-13046-7.
MacKerell Jr A
J Phys Chem B. 2009; 113(10):3235-44.
PMID: 19708270
PMC: 2784611.
DOI: 10.1021/jp8102782.
Rose G
Protein Sci. 2001; 10(8):1691-3.
PMID: 11468367
PMC: 2374099.
DOI: 10.1002/pro.101691.
Mazur J, Jernigan R, Sarai A
Biophys J. 1996; 71(3):1493-506.
PMID: 8874023
PMC: 1233616.
DOI: 10.1016/S0006-3495(96)79352-9.
Rao B, Radding C
Proc Natl Acad Sci U S A. 1994; 91(13):6161-5.
PMID: 8016131
PMC: 44158.
DOI: 10.1073/pnas.91.13.6161.
Conformational characteristics of the dimeric subunits of DNA from energy minimization studies. Mixed sugar-puckered dApdA, dApdT, dTpdA, and dTpdT.
Ponnuswamy P, Thiyagarajan P
Biophys J. 1981; 35(3):731-52.
PMID: 6944112
PMC: 1327560.
DOI: 10.1016/S0006-3495(81)84824-2.
Backbone conformations in secondary and tertiary structural units of nucleic acids. Constraint in the phosphodiester conformation.
Yathindra N, Sundaralingam M
Proc Natl Acad Sci U S A. 1974; 71(9):3325-8.
PMID: 4530303
PMC: 433763.
DOI: 10.1073/pnas.71.9.3325.
Charge calculations in molecular mechanics 6: the calculation of partial atomic charges in nucleic acid bases and the electrostatic contribution to DNA base pairing.
Abraham R, Smith P
Nucleic Acids Res. 1988; 16(6):2639-57.
PMID: 3362677
PMC: 336395.
DOI: 10.1093/nar/16.6.2639.
The influence of terminal 3', 5' phosphates on conformations of dApdA.
Broyde S, Hingerty B
Nucleic Acids Res. 1979; 6(6):2165-78.
PMID: 461185
PMC: 327843.
DOI: 10.1093/nar/6.6.2165.
Anisotropic flexibility of DNA and the nucleosomal structure.
Zhurkin V, Lysov Y, Ivanov V
Nucleic Acids Res. 1979; 6(3):1081-96.
PMID: 440969
PMC: 327755.
DOI: 10.1093/nar/6.3.1081.
Conformational analysis of polynucleotides. I. The favorable left-handed helical model for the poly(8,2'-S-cycloadenylic acid) with high anti conformation.
Fujii S, Tomita K
Nucleic Acids Res. 1976; 3(8):1973-84.
PMID: 184437
PMC: 343053.
DOI: 10.1093/nar/3.8.1973.
A reinterpretation of the infrared linear dichroism of oriented nucleic acid films and a calculation of some effective partial changes on the ribose phosphate backbone.
Beetz Jr C, Ascarelli G, Arnott S
Biophys J. 1979; 28(1):15-26.
PMID: 95569
PMC: 1328606.
DOI: 10.1016/S0006-3495(79)85155-3.
