» Articles » PMID: 39175731

Immunosuppression and Phenotypic Plasticity in an Atlas of Human Hepatocholangiocarcinoma

Overview
Date 2024 Aug 23
PMID 39175731
Authors
Affiliations
Soon will be listed here.
Abstract

Background: Hepatocholangiocarcinoma (H-ChC) has the clinicopathological features of both hepatocellular carcinoma (HCC) and intrahepatic cholangiocarcinoma (iCCA) and is a more aggressive subtype of primary hepatic carcinoma than HCC or iCCA.

Methods: We sequenced 91,112 single-cell transcriptomes from 16 human samples to elucidate the molecular mechanisms underlying the coexistence of HCC and iCCA components in H-ChC.

Results: We observed two molecular subtypes of H-ChC at the whole-transcriptome level (CHP and CIP), where a metabolically active tumour cell subpopulation enriched in CHP was characterized by a cellular pre-differentiation property. To define the heterogeneity of tumours and their associated microenvironments, we observe greater tumour diversity in H-ChC than HCC and iCCA. H-ChC exhibits weaker immune cell infiltration and greater CD8 exhausted T cell (Tex) dysfunction than HCC and iCCA. Then we defined two broad cell states of 6,852 CD8 Tex cells: GZMK CD8 Tex cells and terminal CD8 Tex cells. GZMK CD8 Tex cells exhibited higher infiltration of after treatment in H-ChC, the effector scores and expression of the immune checkpoints of them greatly increased after immunotherapy, which indicated that H-ChC might be more sensitive than HCC or iCCA to immunotherapy.

Conclusions: In this paper, H-ChC was explored, hoping to contribute to the study of mixed tumours in other cancers.

References
1.
Street K, Risso D, Fletcher R, Das D, Ngai J, Yosef N . Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics. BMC Genomics. 2018; 19(1):477. PMC: 6007078. DOI: 10.1186/s12864-018-4772-0. View

2.
Chan J, Quintanal-Villalonga A, Gao V, Xie Y, Allaj V, Chaudhary O . Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer. Cancer Cell. 2021; 39(11):1479-1496.e18. PMC: 8628860. DOI: 10.1016/j.ccell.2021.09.008. View

3.
Tahara Jr E, Tahara H, Kanno M, Naka K, Takeda Y, Matsuzaki T . G1P3, an interferon inducible gene 6-16, is expressed in gastric cancers and inhibits mitochondrial-mediated apoptosis in gastric cancer cell line TMK-1 cell. Cancer Immunol Immunother. 2005; 54(8):729-40. PMC: 11034321. DOI: 10.1007/s00262-004-0645-2. View

4.
Angelici B, Shen L, Schreiber J, Abraham A, Benenson Y . An AAV gene therapy computes over multiple cellular inputs to enable precise targeting of multifocal hepatocellular carcinoma in mice. Sci Transl Med. 2021; 13(624):eabh4456. DOI: 10.1126/scitranslmed.abh4456. View

5.
Liu Z, Yu S, Ye S, Shen Z, Gao L, Han Z . Keratin 17 activates AKT signalling and induces epithelial-mesenchymal transition in oesophageal squamous cell carcinoma. J Proteomics. 2019; 211:103557. DOI: 10.1016/j.jprot.2019.103557. View