Altered Receptor Binding, Antibody Evasion and Retention of T Cell Recognition by the SARS-CoV-2 XBB.1.5 Spike Protein
Overview
Authors
Affiliations
The XBB.1.5 variant of SARS-CoV-2 has rapidly achieved global dominance and exhibits a high growth advantage over previous variants. Preliminary reports suggest that the success of XBB.1.5 stems from mutations within its spike glycoprotein, causing immune evasion and enhanced receptor binding. We present receptor binding studies that demonstrate retention of binding contacts with the human ACE2 receptor and a striking decrease in binding to mouse ACE2 due to the revertant R493Q mutation. Despite extensive evasion of antibody binding, we highlight a region on the XBB.1.5 spike protein receptor binding domain (RBD) that is recognized by serum antibodies from a donor with hybrid immunity, collected prior to the emergence of the XBB.1.5 variant. T cell assays reveal high frequencies of XBB.1.5 spike-specific CD4 and CD8 T cells amongst donors with hybrid immunity, with the CD4 T cells skewed towards a Th1 cell phenotype and having attenuated effector cytokine secretion as compared to ancestral spike protein-specific cells. Thus, while the XBB.1.5 variant has retained efficient human receptor binding and gained antigenic alterations, it remains susceptible to recognition by T cells induced via vaccination and previous infection.
Criscuolo E, Giuliani B, Castelli M, Cavallaro M, Sisti S, Burioni R Front Immunol. 2024; 15:1501200.
PMID: 39664381 PMC: 11631925. DOI: 10.3389/fimmu.2024.1501200.
Seow J, Jefferson G, Keegan M, Yau Y, Snell L, Doores K PLoS Pathog. 2024; 20(11):e1012724.
PMID: 39556615 PMC: 11611254. DOI: 10.1371/journal.ppat.1012724.
Tissue-resident memory T cells contribute to protection against heterologous SARS-CoV-2 challenge.
Odle A, Kar M, Verma A, Sariol A, Meyerholz D, Suthar M JCI Insight. 2024; 9(23).
PMID: 39405115 PMC: 11623939. DOI: 10.1172/jci.insight.184074.
Cryo-electron microscopy in the study of virus entry and infection.
Dutta M, Acharya P Front Mol Biosci. 2024; 11:1429180.
PMID: 39114367 PMC: 11303226. DOI: 10.3389/fmolb.2024.1429180.
A comprehensive overview of recent advances in generative models for antibodies.
Meng F, Zhou N, Hu G, Liu R, Zhang Y, Jing M Comput Struct Biotechnol J. 2024; 23:2648-2660.
PMID: 39027650 PMC: 11254834. DOI: 10.1016/j.csbj.2024.06.016.