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The Molecular Impacts of Retrotransposons in Development and Diseases

Overview
Journal Int J Mol Sci
Publisher MDPI
Date 2023 Nov 25
PMID 38003607
Authors
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Abstract

Retrotransposons are invasive genetic elements that constitute substantial portions of mammalian genomes. They have the potential to influence nearby gene expression through their -regulatory sequences, reverse transcription machinery, and the ability to mold higher-order chromatin structures. Due to their multifaceted functions, it is crucial for host fitness to maintain strict regulation of these parasitic sequences to ensure proper growth and development. This review explores how subsets of retrotransposons have undergone evolutionary exaptation to enhance the complexity of mammalian genomes. It also highlights the significance of regulating these elements, drawing on recent studies conducted in human and murine systems.

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References
1.
HEYMAN T, Agoutin B, Friant S, Wilhelm F, Wilhelm M . Plus-strand DNA synthesis of the yeast retrotransposon Ty1 is initiated at two sites, PPT1 next to the 3' LTR and PPT2 within the pol gene. PPT1 is sufficient for Ty1 transposition. J Mol Biol. 1995; 253(2):291-303. DOI: 10.1006/jmbi.1995.0553. View

2.
Xie M, Hong C, Zhang B, Lowdon R, Xing X, Li D . DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape. Nat Genet. 2013; 45(7):836-41. PMC: 3695047. DOI: 10.1038/ng.2649. View

3.
Percharde M, Lin C, Yin Y, Guan J, Peixoto G, Bulut-Karslioglu A . A LINE1-Nucleolin Partnership Regulates Early Development and ESC Identity. Cell. 2018; 174(2):391-405.e19. PMC: 6046266. DOI: 10.1016/j.cell.2018.05.043. View

4.
Chelmicki T, Roger E, Teissandier A, Dura M, Bonneville L, Rucli S . mA RNA methylation regulates the fate of endogenous retroviruses. Nature. 2021; 591(7849):312-316. DOI: 10.1038/s41586-020-03135-1. View

5.
Denli A, Narvaiza I, Kerman B, Pena M, Benner C, Marchetto M . Primate-specific ORF0 contributes to retrotransposon-mediated diversity. Cell. 2015; 163(3):583-93. DOI: 10.1016/j.cell.2015.09.025. View