Luxan G
    
    
    Elife. 2025; 14.
  
  
    PMID: 40067164
    
          PMC: 11896606.
    
          DOI: 10.7554/eLife.106133.
      
 
                                  
  
    Tian X, Zhang L, Xiang G, Tang Y, Zhu P, Yu S
    
    
    Oncogene. 2025; .
  
  
    PMID: 39984714
    
    
          DOI: 10.1038/s41388-025-03309-z.
      
 
                                  
  
    Islam U, Campelo Dos Santos A, Kanjilal R, Assis R
    
    
    Brief Bioinform. 2025; 26(1).
  
  
    PMID: 39976386
    
          PMC: 11840556.
    
          DOI: 10.1093/bib/bbaf022.
      
 
                                  
  
    Aboreden N, Zhao H, Shan F, Liu F, Zhang H, Blobel G
    
    
    bioRxiv. 2025; .
  
  
    PMID: 39975341
    
          PMC: 11838467.
    
          DOI: 10.1101/2025.01.12.632634.
      
 
                                  
  
    Murakami K, Iida K, Okada M
    
    
    Genes Cells. 2025; 30(2):e70000.
  
  
    PMID: 39904740
    
          PMC: 11794194.
    
          DOI: 10.1111/gtc.70000.
      
 
                              
              
                              
                                      
  Inhibition of triglyceride metabolism-associated enhancers alters lipid deposition during adipocyte differentiation.
  
    Zeng S, Li Z, Li X, Du Q, Zhang Y, Zhong Z
    
    
    FASEB J. 2025; 39(2):e70347.
  
  
    PMID: 39873971
    
          PMC: 11774232.
    
          DOI: 10.1096/fj.202401137R.
      
 
                                          
                                                          
  A genome-wide scan of non-coding RNAs and enhancers for refractive error and myopia.
  
    Tedja M, Swierkowska-Janc J, Enthoven C, Meester-Smoor M, Hysi P, Felix J
    
    
    Hum Genet. 2025; 144(1):67-91.
  
  
    PMID: 39774722
    
          PMC: 11754329.
    
          DOI: 10.1007/s00439-024-02721-x.
      
 
                                          
                                                          
  Transcription factor clusters as information transfer agents.
  
    Munshi R, Ling J, Ryabichko S, Wieschaus E, Gregor T
    
    
    Sci Adv. 2025; 11(1):eadp3251.
  
  
    PMID: 39742495
    
          PMC: 11691696.
    
          DOI: 10.1126/sciadv.adp3251.
      
 
                                          
                                                          
  Promoter Analysis and Dissection Using Reporter Genes, Comparative Genomics, and Gel Shift Assays in Phytophthora.
  
    Vo N, Judelson H
    
    
    Methods Mol Biol. 2024; 2892:1-21.
  
  
    PMID: 39729265
    
    
          DOI: 10.1007/978-1-0716-4330-3_1.
      
 
                                          
                                                          
  LDB1 establishes multi-enhancer networks to regulate gene expression.
  
    Aboreden N, Lam J, Goel V, Wang S, Wang X, Midla S
    
    
    Mol Cell. 2024; 85(2):376-393.e9.
  
  
    PMID: 39721581
    
          PMC: 11741933.
    
          DOI: 10.1016/j.molcel.2024.11.037.
      
 
                                          
                                                          
  HDI-STARR-seq: Condition-specific enhancer discovery in mouse liver in vivo.
  
    Chang T, Waxman D
    
    
    BMC Genomics. 2024; 25(1):1240.
  
  
    PMID: 39716078
    
          PMC: 11668083.
    
          DOI: 10.1186/s12864-024-11162-9.
      
 
                                          
                                                          
  Advancing microbiota therapeutics: the role of synthetic biology in engineering microbial communities for precision medicine.
  
    Nazir A, Hussain F, Raza A
    
    
    Front Bioeng Biotechnol. 2024; 12:1511149.
  
  
    PMID: 39698189
    
          PMC: 11652149.
    
          DOI: 10.3389/fbioe.2024.1511149.
      
 
                                          
                                                          
  Asymmetrical evolution of promoter methylation of mammalian genes after duplication.
  
    De La Fuente M, Mendizabal I, Han M, Yi S, Alvarez-Ponce D
    
    
    Mol Biol Evol. 2024; .
  
  
    PMID: 39686539
    
          PMC: 11683416.
    
          DOI: 10.1093/molbev/msae259.
      
 
                                          
                                                          
  Central control of dynamic gene circuits governs T cell rest and activation.
  
    Arce M, Umhoefer J, Arang N, Kasinathan S, Freimer J, Steinhart Z
    
    
    Nature. 2024; 637(8047):930-939.
  
  
    PMID: 39663454
    
          PMC: 11754113.
    
          DOI: 10.1038/s41586-024-08314-y.
      
 
                                          
                                                          
  Single chromatin fiber profiling and nucleosome position mapping in the human brain.
  
    Peter C, Agarwal A, Watanabe R, Kassim B, Wang X, Lambert T
    
    
    Cell Rep Methods. 2024; 4(12):100911.
  
  
    PMID: 39631398
    
          PMC: 11704683.
    
          DOI: 10.1016/j.crmeth.2024.100911.
      
 
                                          
                                                          
  Two coacting shadow enhancers regulate twin of eyeless expression during early Drosophila development.
  
    Dresch J, Nourie L, Conrad R, Carlson L, Tchantouridze E, Tesfaye B
    
    
    Genetics. 2024; 229(1):1-43.
  
  
    PMID: 39607769
    
          PMC: 11708921.
    
          DOI: 10.1093/genetics/iyae176.
      
 
                                          
                                                          
  Entangled and non-modular enhancer sequences producing independent spatial activities.
  
    Museridze M, Ceolin S, Muhling B, Ramanathan S, Barmina O, Sekhar P
    
    
    Sci Adv. 2024; 10(47):eadr9856.
  
  
    PMID: 39565856
    
          PMC: 11578167.
    
          DOI: 10.1126/sciadv.adr9856.
      
 
                                          
                                                          
  Characterization of the Cannabis sativa glandular trichome epigenome.
  
    Conneely L, Hurgobin B, Ng S, Tamiru-Oli M, Lewsey M
    
    
    BMC Plant Biol. 2024; 24(1):1075.
  
  
    PMID: 39538149
    
          PMC: 11562870.
    
          DOI: 10.1186/s12870-024-05787-x.
      
 
                                          
                                                          
  DNA regulatory element cooperation and competition in transcription.
  
    Lee H, Friedman M, Kim S, Oh S
    
    
    BMB Rep. 2024; 57(12):509-520.
  
  
    PMID: 39523506
    
          PMC: 11693600.
    
      
 
                                          
                                                          
  DeepDualEnhancer: A Dual-Feature Input DNABert Based Deep Learning Method for Enhancer Recognition.
  
    Song T, Song H, Pan Z, Gao Y, Dai H, Wang X
    
    
    Int J Mol Sci. 2024; 25(21).
  
  
    PMID: 39519295
    
          PMC: 11546905.
    
          DOI: 10.3390/ijms252111744.