» Articles » PMID: 33526011

Single-cell RNA-seq Reveals a Concomitant Delay in Differentiation and Cell Cycle of Aged Hematopoietic Stem Cells

Overview
Journal BMC Biol
Publisher Biomed Central
Specialty Biology
Date 2021 Feb 2
PMID 33526011
Citations 26
Authors
Affiliations
Soon will be listed here.
Abstract

Background: Hematopoietic stem cells (HSCs) are the guarantor of the proper functioning of hematopoiesis due to their incredible diversity of potential. During aging, heterogeneity of HSCs changes, contributing to the deterioration of the immune system. In this study, we revisited mouse HSC compartment and its transcriptional plasticity during aging at unicellular scale.

Results: Through the analysis of 15,000 young and aged transcriptomes, we identified 15 groups of HSCs revealing rare and new specific HSC abilities that change with age. The implantation of new trajectories complemented with the analysis of transcription factor activities pointed consecutive states of HSC differentiation that were delayed by aging and explained the bias in differentiation of older HSCs. Moreover, reassigning cell cycle phases for each HSC clearly highlighted an imbalance of the cell cycle regulators of very immature aged HSCs that may contribute to their accumulation in an undifferentiated state.

Conclusions: Our results establish a new reference map of HSC differentiation in young and aged mice and reveal a potential mechanism that delays the differentiation of aged HSCs and could promote the emergence of age-related hematologic diseases.

Citing Articles

A Senescent Cluster in Aged Human Hematopoietic Stem Cell Compartment as Target for Senotherapy.

Poisa-Beiro L, Landry J, Yan B, Kardorff M, Eckstein V, Villacorta L Int J Mol Sci. 2025; 26(2).

PMID: 39859500 PMC: 11766015. DOI: 10.3390/ijms26020787.


Sexual dimorphism in the mouse bone marrow niche regulates hematopoietic engraftment via sex-specific Kdm5c/Cxcl12 signaling.

Cui X, Hou L, Yan B, Liu J, Zhang C, Sui P J Clin Invest. 2025; 135(5).

PMID: 39836478 PMC: 11870739. DOI: 10.1172/JCI182125.


Sex-dependent differences in hematopoietic stem cell aging and leukemogenic potential.

Zhang C, Hao T, Bortoluzzi A, Chen M, Wu X, Wang J Oncogene. 2024; 44(2):64-78.

PMID: 39487323 PMC: 11706783. DOI: 10.1038/s41388-024-03197-9.


Cell cycle expression heterogeneity predicts degree of differentiation.

Noller K, Cahan P Brief Bioinform. 2024; 25(6).

PMID: 39446193 PMC: 11500603. DOI: 10.1093/bib/bbae536.


Aging is associated with functional and molecular changes in distinct hematopoietic stem cell subsets.

Su T, Hauenstein J, Somuncular E, Dumral O, Leonard E, Gustafsson C Nat Commun. 2024; 15(1):7966.

PMID: 39261515 PMC: 11391069. DOI: 10.1038/s41467-024-52318-1.


References
1.
Spangrude G, Heimfeld S, Weissman I . Purification and characterization of mouse hematopoietic stem cells. Science. 1988; 241(4861):58-62. DOI: 10.1126/science.2898810. View

2.
Svendsen A, Yang D, Kim K, Lazare S, Skinder N, Zwart E . A comprehensive transcriptome signature of murine hematopoietic stem cell aging. Blood. 2021; 138(6):439-451. DOI: 10.1182/blood.2020009729. View

3.
Beerman I, Bhattacharya D, Zandi S, Sigvardsson M, Weissman I, Bryder D . Functionally distinct hematopoietic stem cells modulate hematopoietic lineage potential during aging by a mechanism of clonal expansion. Proc Natl Acad Sci U S A. 2010; 107(12):5465-70. PMC: 2851806. DOI: 10.1073/pnas.1000834107. View

4.
Buettner F, Natarajan K, Casale F, Proserpio V, Scialdone A, Theis F . Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells. Nat Biotechnol. 2015; 33(2):155-60. DOI: 10.1038/nbt.3102. View

5.
Laurenti E, Gottgens B . From haematopoietic stem cells to complex differentiation landscapes. Nature. 2018; 553(7689):418-426. PMC: 6555401. DOI: 10.1038/nature25022. View