» Articles » PMID: 33294788

Developmentally Regulated Novel Non-coding Anti-sense Regulators of MRNA Translation in

Overview
Journal iScience
Publisher Cell Press
Date 2020 Dec 9
PMID 33294788
Citations 9
Authors
Affiliations
Soon will be listed here.
Abstract

The parasite is the causative agent of sleeping sickness and cycles between insect and mammalian hosts. The parasite appears to lack conventional transcriptional regulation of protein coding genes, and mRNAs are processed from polycistronic transcripts by the concerted action of splicing and polyadenylation. Regulation of mRNA function is mediated mainly by RNA binding proteins affecting mRNA stability and translation. In this study, we describe the identification of 62 non-coding (nc) RNAs that are developmentally regulated and/or respond to stress. We characterized two novel anti-sense RNA regulators (TBsRNA-33 and 37) that originate from the rRNA loci, associate with ribosomes and polyribosomes, and interact with distinct mRNA species to regulate translation. Thus, this study suggests for the first-time anti-sense RNA regulators as an additional layer for controlling gene expression in these parasites.

Citing Articles

Molecular Cellular Parasitology: The Decades and Challenges Ahead.

Field M Front Parasitol. 2025; 1():963515.

PMID: 39816465 PMC: 11732077. DOI: 10.3389/fpara.2022.963515.


Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.

Rajan K, Aryal S, Hiregange D, Bashan A, Madmoni H, Olami M Cell Rep. 2024; 43(5):114203.

PMID: 38722744 PMC: 11156624. DOI: 10.1016/j.celrep.2024.114203.


Ribosome Specialization in Protozoa Parasites.

Rodriguez-Almonacid C, Kellogg M, Karamyshev A, Karamysheva Z Int J Mol Sci. 2023; 24(8).

PMID: 37108644 PMC: 10138883. DOI: 10.3390/ijms24087484.


Nanopore-Based Direct RNA Sequencing of the Transcriptome Identifies Novel lncRNAs.

Kruse E, Goringer H Genes (Basel). 2023; 14(3).

PMID: 36980882 PMC: 10048164. DOI: 10.3390/genes14030610.


Dissecting Trypanosoma brucei RRP44 function in the maturation of segmented ribosomal RNA using a regulated genetic complementation system.

Guerra-Slompo E, Cesaro G, Guimaraes B, Zanchin N Nucleic Acids Res. 2023; 51(1):396-419.

PMID: 36610751 PMC: 9841430. DOI: 10.1093/nar/gkac1217.


References
1.
Liang X, Xu Y, Michaeli S . The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA. RNA. 2002; 8(2):237-46. PMC: 1370245. DOI: 10.1017/s1355838202018290. View

2.
Kramer S, Queiroz R, Ellis L, Webb H, Hoheisel J, Clayton C . Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2(alpha) phosphorylation at Thr169. J Cell Sci. 2008; 121(Pt 18):3002-14. PMC: 2871294. DOI: 10.1242/jcs.031823. View

3.
Fricker R, Brogli R, Luidalepp H, Wyss L, Fasnacht M, Joss O . A tRNA half modulates translation as stress response in Trypanosoma brucei. Nat Commun. 2019; 10(1):118. PMC: 6328589. DOI: 10.1038/s41467-018-07949-6. View

4.
Clayton C . Regulation of gene expression in trypanosomatids: living with polycistronic transcription. Open Biol. 2019; 9(6):190072. PMC: 6597758. DOI: 10.1098/rsob.190072. View

5.
Rajan K, Chikne V, Decker K, Waldman Ben-Asher H, Michaeli S . Unique Aspects of rRNA Biogenesis in Trypanosomatids. Trends Parasitol. 2019; 35(10):778-794. DOI: 10.1016/j.pt.2019.07.012. View