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Description of Sp. Nov. from Treeshrews (, ) in Northern Borneo with Annotations on the Utility of COI and 18S RDNA Sequences for Species Delineation

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Date 2020 Jul 23
PMID 32695576
Citations 8
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Abstract

sp. nov. was discovered in histological sections of striated musculature of treeshrews (, . ) from Northern Borneo. Sarcocysts were cigar-shaped, 102 μm-545 μm long, and on average 53 μm in diameter. The striated cyst wall varied in thickness (2-10 μm), depending on whether the finger-like, villous protrusions (VP) were bent. Ultrastructurally, sarcocysts were similar to wall type 12 but basal microtubules extended into VPs that tapered off with a unique U-shaped, electron-dense apical structure. In phylogenetic trees of the nuclear 18S rRNA gene, . formed a distinct branch within a monophyletic subclade of spp. with (colubrid) snake-rodent life cycle. We mapped all intraspecific (two haplotypes) and interspecific nucleotide substitutions to the secondary structure of the 18S rRNA gene: in both cases, the highest variability occurred within helices V2 and V4 but intraspecific variability mostly related to transitions, while transition/transversion ratios between . , . , and . were skewed towards transversions. Lack of relevant sequences restricted phylogenetic analysis of the mitochondrial Cytochrome C oxidase subunit I (COI) gene to include only one species of recovered from a snake host () with which the new species formed a sister relationship. We confirm the presence of the functionally important elements of the COI barcode amino acid sequence of . , whereby the frequency of functionally important amino acids (Alanine, Serine) was markedly different to other taxa of the Sarcocystidae. We regard . a new species, highlighting that structurally or functionally important aspects of the 18S rRNA and COI could expand their utility for delineation of species. We also address the question why treeshrews, believed to be close to primates, carry a parasite that is genetically close to a lineage preferably developing in the Rodentia as intermediate hosts.

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