» Articles » PMID: 32240397

Deep-learning-based Motion-correction Algorithm in Optical Resolution Photoacoustic Microscopy

Overview
Date 2020 Apr 3
PMID 32240397
Citations 18
Authors
Affiliations
Soon will be listed here.
Abstract

In this study, we propose a deep-learning-based method to correct motion artifacts in optical resolution photoacoustic microscopy (OR-PAM). The method is a convolutional neural network that establishes an end-to-end map from input raw data with motion artifacts to output corrected images. First, we performed simulation studies to evaluate the feasibility and effectiveness of the proposed method. Second, we employed this method to process images of rat brain vessels with multiple motion artifacts to evaluate its performance for in vivo applications. The results demonstrate that this method works well for both large blood vessels and capillary networks. In comparison with traditional methods, the proposed method in this study can be easily modified to satisfy different scenarios of motion corrections in OR-PAM by revising the training sets.

Citing Articles

Towards photoacoustic human imaging: Shining a new light on clinical diagnostics.

Wang Z, Yang F, Zhang W, Xiong K, Yang S Fundam Res. 2024; 4(5):1314-1330.

PMID: 39431136 PMC: 11489505. DOI: 10.1016/j.fmre.2023.01.008.


Unsupervised deep learning enables real-time image registration of fast-scanning optical-resolution photoacoustic microscopy.

Hong X, Tang F, Wang L, Chen J Photoacoustics. 2024; 38:100632.

PMID: 39100197 PMC: 11296048. DOI: 10.1016/j.pacs.2024.100632.


Implicit neural representations in light microscopy.

Hauser S, Brosig J, Murthy B, Attardo A, Kist A Biomed Opt Express. 2024; 15(4):2175-2186.

PMID: 38633078 PMC: 11019677. DOI: 10.1364/BOE.515517.


Niche preclinical and clinical applications of photoacoustic imaging with endogenous contrast.

John S, Hester S, Basij M, Paul A, Xavierselvan M, Mehrmohammadi M Photoacoustics. 2023; 32:100533.

PMID: 37636547 PMC: 10448345. DOI: 10.1016/j.pacs.2023.100533.


Photoacoustic imaging for microcirculation.

Mirg S, Turner K, Chen H, Drew P, Kothapalli S Microcirculation. 2022; 29(6-7):e12776.

PMID: 35793421 PMC: 9870710. DOI: 10.1111/micc.12776.


References
1.
Zhang H, Maslov K, Stoica G, Wang L . Functional photoacoustic microscopy for high-resolution and noninvasive in vivo imaging. Nat Biotechnol. 2006; 24(7):848-51. DOI: 10.1038/nbt1220. View

2.
LeCun Y, Bengio Y, Hinton G . Deep learning. Nature. 2015; 521(7553):436-44. DOI: 10.1038/nature14539. View

3.
Dong C, Loy C, He K, Tang X . Image Super-Resolution Using Deep Convolutional Networks. IEEE Trans Pattern Anal Mach Intell. 2016; 38(2):295-307. DOI: 10.1109/TPAMI.2015.2439281. View

4.
Zhao H, Chen N, Li T, Zhang J, Lin R, Gong X . Motion Correction in Optical Resolution Photoacoustic Microscopy. IEEE Trans Med Imaging. 2019; 38(9):2139-2150. DOI: 10.1109/TMI.2019.2893021. View

5.
Wang L, Yao J . A practical guide to photoacoustic tomography in the life sciences. Nat Methods. 2016; 13(8):627-38. PMC: 4980387. DOI: 10.1038/nmeth.3925. View