Folding and Lipid Composition Determine Membrane Interaction of the Disordered Protein COR15A
Overview
Authors
Affiliations
Plants from temperate climates, such as the model plant Arabidopsis thaliana, are challenged with seasonal low temperatures that lead to increased freezing tolerance in fall in a process termed cold acclimation. Among other adaptations, this involves the accumulation of cold-regulated (COR) proteins, such as the intrinsically disordered chloroplast-localized protein COR15A. Together with its close homolog COR15B, it stabilizes chloroplast membranes during freezing. COR15A folds into amphipathic α-helices in the presence of high concentrations of low-molecular-mass crowders or upon dehydration. Under these conditions, the (partially) folded protein binds peripherally to membranes. In our study, we have used coarse-grained molecular dynamics simulations to elucidate the details of COR15A-membrane binding and its effects on membrane structure and dynamics. Simulation results indicate that at least partial folding of COR15A and the presence of highly unsaturated galactolipids in the membranes are necessary for efficient membrane binding. The bound protein is stabilized on the membrane by interactions of charged and polar amino acids with galactolipid headgroups and by interactions of hydrophobic amino acids with the upper part of the fatty acyl chains. Experimentally, the presence of liposomes made from a mixture of lipids mimicking chloroplast membranes induces additional folding in COR15A under conditions of partial dehydration, in agreement with the simulation results.
Hernandez-Sanchez I, Rindfleisch T, Alpers J, Dulle M, Garvey C, Knox-Brown P Protein Sci. 2024; 33(5):e4989.
PMID: 38659213 PMC: 11043620. DOI: 10.1002/pro.4989.
Li X, Yu C, Gomez-Navarro N, Stancheva V, Zhu H, Murthy A PNAS Nexus. 2024; 3(1):pgae006.
PMID: 38269070 PMC: 10808001. DOI: 10.1093/pnasnexus/pgae006.
Low-temperature and circadian signals are integrated by the sigma factor SIG5.
Cano-Ramirez D, Panter P, Takemura T, de Fraine T, de Barros Dantas L, Dekeya R Nat Plants. 2023; 9(4):661-672.
PMID: 36997687 PMC: 10119024. DOI: 10.1038/s41477-023-01377-1.
Specialty grand challenge in plant biophysics and modeling.
Dreyer I Front Plant Sci. 2022; 13:991526.
PMID: 36119613 PMC: 9478854. DOI: 10.3389/fpls.2022.991526.
Lipid/water interface of galactolipid bilayers in different lyotropic liquid-crystalline phases.
Hryc J, Szczelina R, Markiewicz M, Pasenkiewicz-Gierula M Front Mol Biosci. 2022; 9:958537.
PMID: 36046609 PMC: 9423040. DOI: 10.3389/fmolb.2022.958537.