Characterization of the IleS-lsp Operon in Escherichia Coli. Identification of an Open Reading Frame Upstream of the IleS Gene and Potential Promoter(s) for the IleS-lsp Operon
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The preceding paper presents evidence for the co-transcriptional expression of the ileS and lsp genes in Escherichia coli. To identify the promoter for the ileS-lsp operon, we have determined the nucleotide sequence of an 1.8-kilobase DNA fragment between the rpsT and IleS genes. The sequence data have revealed an open reading frame, designated gene X, which encodes a polypeptide with 312 amino acid residues. Both in vivo and in vitro expressions of the x gene result in the synthesis of a soluble protein with an apparent Mr of 35,000. The x gene is transcribed in the same direction as that of the ileS-lsp operon and opposite to that of the upstream adjacent rpsT gene. No transcription termination sequence can be discerned in the intercistronic region between the x and ileS genes. DNase I footprinting experiment revealed a RNA polymerase binding site at 170-151 base pairs upstream of the x gene.
Silencing of Essential Genes within a Highly Coordinated Operon in Escherichia coli.
Goh S, Hohmeier A, Stone T, Offord V, Sarabia F, Garcia-Ruiz C Appl Environ Microbiol. 2015; 81(16):5650-9.
PMID: 26070674 PMC: 4510190. DOI: 10.1128/AEM.01444-15.
High accuracy operon prediction method based on STRING database scores.
Taboada B, Verde C, Merino E Nucleic Acids Res. 2010; 38(12):e130.
PMID: 20385580 PMC: 2896540. DOI: 10.1093/nar/gkq254.
Linkage map of Escherichia coli K-12, edition 10: the traditional map.
Berlyn M Microbiol Mol Biol Rev. 1998; 62(3):814-984.
PMID: 9729611 PMC: 98936. DOI: 10.1128/MMBR.62.3.814-984.1998.
Mack M, van Loon A, Hohmann H J Bacteriol. 1998; 180(4):950-5.
PMID: 9473052 PMC: 106977. DOI: 10.1128/JB.180.4.950-955.1998.
Grundy F, Haldeman M, Hornblow G, Ward J, Chalker A, Henkin T J Bacteriol. 1997; 179(11):3767-72.
PMID: 9171428 PMC: 179176. DOI: 10.1128/jb.179.11.3767-3772.1997.