Fasolo A, Deb S, Stevanato P, Concheri G, Squartini A
PLoS One. 2024; 19(10):e0309065.
PMID: 39361586
PMC: 11449282.
DOI: 10.1371/journal.pone.0309065.
Martinez-Villegas L, Lado P, Klompen H, Wang S, Cummings C, Pesapane R
PLoS One. 2024; 19(6):e0304959.
PMID: 38857239
PMC: 11164389.
DOI: 10.1371/journal.pone.0304959.
McGrath A, Lema K, Egan S, Wood G, Vadillo Gonzalez S, Kjelleberg S
NPJ Biofilms Microbiomes. 2024; 10(1):33.
PMID: 38553475
PMC: 10980776.
DOI: 10.1038/s41522-024-00503-x.
Bu Y, Feng L, Xu D, Zhang S, Liang L, Si J
Animals (Basel). 2024; 14(1).
PMID: 38200843
PMC: 10778104.
DOI: 10.3390/ani14010112.
Heritier H, Allemann C, Balakiriev O, Boulanger V, Carroll S, Froidevaux N
PLOS Digit Health. 2023; 2(11):e0000389.
PMID: 38033170
PMC: 10688868.
DOI: 10.1371/journal.pdig.0000389.
Integrating current analyses of the breast cancer microbiome.
Sohail S, Burns M
PLoS One. 2023; 18(9):e0291320.
PMID: 37699008
PMC: 10497162.
DOI: 10.1371/journal.pone.0291320.
The Impact of a Commercial Biostimulant on the Grape Mycobiota of cv. Barbera.
Pulcini L, Bona E, Vaudano E, Tsolakis C, Garcia-Moruno E, Costantini A
Microorganisms. 2023; 11(8).
PMID: 37630432
PMC: 10457965.
DOI: 10.3390/microorganisms11081873.
A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses.
Hakimzadeh A, Abdala Asbun A, Albanese D, Bernard M, Buchner D, Callahan B
Mol Ecol Resour. 2023; 24(5):e13847.
PMID: 37548515
PMC: 10847385.
DOI: 10.1111/1755-0998.13847.
Revisiting the intrinsic mycobiome in pancreatic cancer.
Fletcher A, Kelly M, Eckhoff A, Allen P
Nature. 2023; 620(7972):E1-E6.
PMID: 37532819
PMC: 11062486.
DOI: 10.1038/s41586-023-06292-1.
Exploring the correlation of metabolites changes and microbial succession in solid-state fermentation of Sichuan Sun-dried vinegar.
Dong K, Li W, Xu Q, Hong Z, Zhang S, Zhang B
BMC Microbiol. 2023; 23(1):197.
PMID: 37488503
PMC: 10364395.
DOI: 10.1186/s12866-023-02947-1.
Comparison of Oxford Nanopore Technologies and Illumina MiSeq sequencing with mock communities and agricultural soil.
Stevens B, Creed T, Reardon C, Manter D
Sci Rep. 2023; 13(1):9323.
PMID: 37291169
PMC: 10250467.
DOI: 10.1038/s41598-023-36101-8.
Different and unified responses of soil bacterial and fungal community composition and predicted functional potential to 3 years' drought stress in a semiarid alpine grassland.
Wan Q, Li L, Liu B, Zhang Z, Liu Y, Xie M
Front Microbiol. 2023; 14:1104944.
PMID: 37082184
PMC: 10112540.
DOI: 10.3389/fmicb.2023.1104944.
Flex Meta-Storms elucidates the microbiome local beta-diversity under specific phenotypes.
Zhang M, Zhang W, Chen Y, Zhao J, Wu S, Su X
Bioinformatics. 2023; 39(4).
PMID: 36946295
PMC: 10082668.
DOI: 10.1093/bioinformatics/btad148.
The Bacterial DNA Profiling of Chorionic Villi and Amniotic Fluids Reveals Overlaps with Maternal Oral, Vaginal, and Gut Microbiomes.
Campisciano G, Zanotta N, Quadrifoglio M, Careri A, Torresani A, Cason C
Int J Mol Sci. 2023; 24(3).
PMID: 36769194
PMC: 9917689.
DOI: 10.3390/ijms24032873.
Microbial Community Structure among Honey Samples of Different Pollen Origin.
Stavropoulou E, Remmas N, Voidarou C, Vrioni G, Konstantinidis T, Ntougias S
Antibiotics (Basel). 2023; 12(1).
PMID: 36671302
PMC: 9855004.
DOI: 10.3390/antibiotics12010101.
Valorization as a biofertilizer of an agricultural residue leachate: Metagenomic characterization and growth promotion test by PGPB in the forage plant (alfalfa).
Robas Mora M, Fernandez Pastrana V, Lobo A, Gomez P
Front Microbiol. 2023; 13:1048154.
PMID: 36620069
PMC: 9815802.
DOI: 10.3389/fmicb.2022.1048154.
Ecological Observations Based on Functional Gene Sequencing Are Sensitive to the Amplicon Processing Method.
Cholet F, Lisik A, Agogue H, Ijaz U, Pineau P, Lachaussee N
mSphere. 2022; 7(4):e0032422.
PMID: 35938727
PMC: 9429940.
DOI: 10.1128/msphere.00324-22.
Invariant natural killer T cells minimally influence gut microbiota composition in mice.
Lin Q, Kuypers M, Liu Z, Copeland J, Chan D, Robertson S
Gut Microbes. 2022; 14(1):2104087.
PMID: 35912530
PMC: 9348128.
DOI: 10.1080/19490976.2022.2104087.
Updating Urinary Microbiome Analyses to Enhance Biologic Interpretation.
Siddiqui N, Ma L, Brubaker L, Mao J, Hoffman C, Dahl E
Front Cell Infect Microbiol. 2022; 12:789439.
PMID: 35899056
PMC: 9309214.
DOI: 10.3389/fcimb.2022.789439.
Early Weaning and Milk Substitutes Affect the Gut Microbiome, Metabolomics, and Antibody Profile in Goat Kids Suffering From Diarrhea.
Zhong T, Wang C, Wang X, Freitas-de-Melo A, Zeng B, Zhao Q
Front Microbiol. 2022; 13:904475.
PMID: 35801115
PMC: 9253616.
DOI: 10.3389/fmicb.2022.904475.