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WIPI2 Links LC3 Conjugation with PI3P, Autophagosome Formation, and Pathogen Clearance by Recruiting Atg12-5-16L1

Overview
Journal Mol Cell
Publisher Cell Press
Specialty Cell Biology
Date 2014 Jun 24
PMID 24954904
Citations 441
Authors
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Abstract

Mammalian cell homeostasis during starvation depends on initiation of autophagy by endoplasmic reticulum-localized phosphatidylinositol 3-phosphate (PtdIns(3)P) synthesis. Formation of double-membrane autophagosomes that engulf cytosolic components requires the LC3-conjugating Atg12-5-16L1 complex. The molecular mechanisms of Atg12-5-16L1 recruitment and significance of PtdIns(3)P synthesis at autophagosome formation sites are unknown. By identifying interacting partners of WIPIs, WD-repeat PtdIns(3)P effector proteins, we found that Atg16L1 directly binds WIPI2b. Mutation experiments and ectopic localization of WIPI2b to plasma membrane show that WIPI2b is a PtdIns(3)P effector upstream of Atg16L1 and is required for LC3 conjugation and starvation-induced autophagy through recruitment of the Atg12-5-16L1 complex. Atg16L1 mutants, which do not bind WIPI2b but bind FIP200, cannot rescue starvation-induced autophagy in Atg16L1-deficient MEFs. WIPI2b is also required for autophagic clearance of pathogenic bacteria. WIPI2b binds the membrane surrounding Salmonella and recruits the Atg12-5-16L1 complex, initiating LC3 conjugation, autophagosomal membrane formation, and engulfment of Salmonella.

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References
1.
Saitoh T, Fujita N, Jang M, Uematsu S, Yang B, Satoh T . Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production. Nature. 2008; 456(7219):264-8. DOI: 10.1038/nature07383. View

2.
Nishimura T, Kaizuka T, Cadwell K, Sahani M, Saitoh T, Akira S . FIP200 regulates targeting of Atg16L1 to the isolation membrane. EMBO Rep. 2013; 14(3):284-91. PMC: 3589088. DOI: 10.1038/embor.2013.6. View

3.
Itakura E, Mizushima N . Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins. Autophagy. 2010; 6(6):764-76. PMC: 3321844. DOI: 10.4161/auto.6.6.12709. View

4.
Watanabe Y, Kobayashi T, Yamamoto H, Hoshida H, Akada R, Inagaki F . Structure-based analyses reveal distinct binding sites for Atg2 and phosphoinositides in Atg18. J Biol Chem. 2012; 287(38):31681-90. PMC: 3442503. DOI: 10.1074/jbc.M112.397570. View

5.
Mizushima N, Yoshimori T, Ohsumi Y . The role of Atg proteins in autophagosome formation. Annu Rev Cell Dev Biol. 2011; 27:107-32. DOI: 10.1146/annurev-cellbio-092910-154005. View