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Molecular Logic Gates for DNA Analysis: Detection of Rifampin Resistance in M. Tuberculosis DNA

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Specialty Chemistry
Date 2012 Aug 14
PMID 22888076
Citations 8
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Abstract

Elementary, Dr. Watson! A combination of YES and OR logic gates was applied to differentiate between DNA sequences of wild-type and rifampin-resistant (Rif(r)) Mycobacterium tuberculosis (Mtb) in a multiplex real-time fluorescent assay.

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References
1.
Lake A, Shang S, Kolpashchikov D . Molecular logic gates connected through DNA four-way junctions. Angew Chem Int Ed Engl. 2010; 49(26):4459-62. DOI: 10.1002/anie.200907135. View

2.
Tyagi S, Kramer F . Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol. 1996; 14(3):303-8. DOI: 10.1038/nbt0396-303. View

3.
Troesch A, Nguyen H, Miyada C, Desvarenne S, Gingeras T, KAPLAN P . Mycobacterium species identification and rifampin resistance testing with high-density DNA probe arrays. J Clin Microbiol. 1998; 37(1):49-55. PMC: 84166. DOI: 10.1128/JCM.37.1.49-55.1999. View

4.
Gerasimova Y, Kolpashchikov D . Connectable DNA logic gates: OR and XOR logics. Chem Asian J. 2012; 7(3):534-40. DOI: 10.1002/asia.201100664. View

5.
Zhang D, Seelig G . Dynamic DNA nanotechnology using strand-displacement reactions. Nat Chem. 2011; 3(2):103-13. DOI: 10.1038/nchem.957. View