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The Cul4-Ddb1(Cdt)² Ubiquitin Ligase Inhibits Invasion of a Boundary-associated Antisilencing Factor into Heterochromatin

Overview
Journal Cell
Publisher Cell Press
Specialty Cell Biology
Date 2011 Jan 11
PMID 21215368
Citations 77
Authors
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Abstract

Partitioning of chromosomes into euchromatic and heterochromatic domains requires mechanisms that specify boundaries. The S. pombe JmjC family protein Epe1 prevents the ectopic spread of heterochromatin and is itself concentrated at boundaries. Paradoxically, Epe1 is recruited to heterochromatin by HP1 silencing factors that are distributed throughout heterochromatin. We demonstrate here that the selective enrichment of Epe1 at boundaries requires its regulation by the conserved Cul4-Ddb1(Cdt)² ubiquitin ligase, which directly recognizes Epe1 and promotes its polyubiquitylation and degradation. Strikingly, in cells lacking the ligase, Epe1 persists in the body of heterochromatin thereby inducing a defect in gene silencing. Epe1 is the sole target of the Cul4-Ddb1(Cdt)² complex whose destruction is necessary for the preservation of heterochromatin. This mechanism acts parallel with phosphorylation of HP1/Swi6 by CK2 to restrict Epe1. We conclude that the ubiquitin-dependent sculpting of the chromosomal distribution of an antisilencing factor is critical for heterochromatin boundaries to form correctly.

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References
1.
Talbert P, Henikoff S . Spreading of silent chromatin: inaction at a distance. Nat Rev Genet. 2006; 7(10):793-803. DOI: 10.1038/nrg1920. View

2.
Noma K, Cam H, Maraia R, Grewal S . A role for TFIIIC transcription factor complex in genome organization. Cell. 2006; 125(5):859-72. DOI: 10.1016/j.cell.2006.04.028. View

3.
Wang H, Wang L, Erdjument-Bromage H, Vidal M, Tempst P, Jones R . Role of histone H2A ubiquitination in Polycomb silencing. Nature. 2004; 431(7010):873-8. DOI: 10.1038/nature02985. View

4.
OConnell B, Harper J . Ubiquitin proteasome system (UPS): what can chromatin do for you?. Curr Opin Cell Biol. 2007; 19(2):206-14. DOI: 10.1016/j.ceb.2007.02.014. View

5.
Jackson S, Xiong Y . CRL4s: the CUL4-RING E3 ubiquitin ligases. Trends Biochem Sci. 2009; 34(11):562-70. PMC: 2783741. DOI: 10.1016/j.tibs.2009.07.002. View