Deng J, Cui Q
J Am Chem Soc. 2023; 145(20):11333-11347.
PMID: 37172218
PMC: 10810092.
DOI: 10.1021/jacs.3c02423.
Tan Y, Xue B, Yew W
Molecules. 2021; 26(5).
PMID: 33806660
PMC: 7961827.
DOI: 10.3390/molecules26051389.
Lai R, Cui Q
J Phys Chem B. 2020; 124(42):9371-9384.
PMID: 33030898
PMC: 7647665.
DOI: 10.1021/acs.jpcb.0c07863.
Zhang J, Balsbaugh J, Gao S, Ahn N, Klinman J
Proc Natl Acad Sci U S A. 2020; 117(20):10797-10805.
PMID: 32371482
PMC: 7245127.
DOI: 10.1073/pnas.1917219117.
Lu X, Fang D, Ito S, Okamoto Y, Ovchinnikov V, Cui Q
Mol Simul. 2016; 42(13):1056-1078.
PMID: 27563170
PMC: 4993472.
DOI: 10.1080/08927022.2015.1132317.
In-Cell Enzymology To Probe His-Heme Ligation in Heme Oxygenase Catalysis.
Sigala P, Morante K, Tsumoto K, Caaveiro J, Goldberg D
Biochemistry. 2016; 55(34):4836-49.
PMID: 27490825
PMC: 5007156.
DOI: 10.1021/acs.biochem.6b00562.
Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently.
Currin A, Swainston N, Day P, Kell D
Chem Soc Rev. 2014; 44(5):1172-239.
PMID: 25503938
PMC: 4349129.
DOI: 10.1039/c4cs00351a.
Stabilization of different types of transition states in a single enzyme active site: QM/MM analysis of enzymes in the alkaline phosphatase superfamily.
Hou G, Cui Q
J Am Chem Soc. 2013; 135(28):10457-69.
PMID: 23786365
PMC: 3759165.
DOI: 10.1021/ja403293d.
Catalytic control of enzymatic fluorine specificity.
Weeks A, Chang M
Proc Natl Acad Sci U S A. 2012; 109(48):19667-72.
PMID: 23150553
PMC: 3511759.
DOI: 10.1073/pnas.1212591109.
A glimpse of enzymology within the idea of systems.
Liu C, Fan D, Shi Y, Zhou Q
Sci China Life Sci. 2012; 55(9):826-33.
PMID: 23015132
PMC: 7088909.
DOI: 10.1007/s11427-012-4371-2.
The dynamic determinants of reaction specificity in the IMPDH/GMPR family of (β/α)(8) barrel enzymes.
Hedstrom L
Crit Rev Biochem Mol Biol. 2012; 47(3):250-63.
PMID: 22332716
PMC: 3337344.
DOI: 10.3109/10409238.2012.656843.
QM/MM analysis suggests that Alkaline Phosphatase (AP) and nucleotide pyrophosphatase/phosphodiesterase slightly tighten the transition state for phosphate diester hydrolysis relative to solution: implication for catalytic promiscuity in the AP....
Hou G, Cui Q
J Am Chem Soc. 2011; 134(1):229-46.
PMID: 22097879
PMC: 3257412.
DOI: 10.1021/ja205226d.
Cofactor mobility determines reaction outcome in the IMPDH and GMPR (β-α)8 barrel enzymes.
Patton G, Stenmark P, Gollapalli D, Sevastik R, Kursula P, Flodin S
Nat Chem Biol. 2011; 7(12):950-8.
PMID: 22037469
PMC: 4552316.
DOI: 10.1038/nchembio.693.
Single-molecule paleoenzymology probes the chemistry of resurrected enzymes.
Perez-Jimenez R, Ingles-Prieto A, Zhao Z, Sanchez-Romero I, Alegre-Cebollada J, Kosuri P
Nat Struct Mol Biol. 2011; 18(5):592-6.
PMID: 21460845
PMC: 3087858.
DOI: 10.1038/nsmb.2020.
Coupled motions in enzyme catalysis.
Nashine V, Hammes-Schiffer S, Benkovic S
Curr Opin Chem Biol. 2010; 14(5):644-51.
PMID: 20729130
PMC: 2953590.
DOI: 10.1016/j.cbpa.2010.07.020.