Atatreh N, Mahgoub R, Ghattas M
J Enzyme Inhib Med Chem. 2025; 40(1):2460045.
PMID: 39912405
PMC: 11803818.
DOI: 10.1080/14756366.2025.2460045.
Ren J, Zhang Z, Xia Y, Zhao D, Li D, Zhang S
Molecules. 2025; 30(2).
PMID: 39860219
PMC: 11767629.
DOI: 10.3390/molecules30020351.
Shen Y, Smith M, Louis J, Bax A
J Biomol NMR. 2024; 79(1):47-57.
PMID: 39661299
PMC: 11832631.
DOI: 10.1007/s10858-024-00456-5.
Barazorda-Ccahuana H, Carcamo Rodriguez E, Centeno-Lopez A, Paco-Chipana M, Goyzueta-Mamani L, Chavez-Fumagalli M
F1000Res. 2024; 13:246.
PMID: 39583212
PMC: 11585855.
DOI: 10.12688/f1000research.143633.3.
Barozi V, Chakraborty S, Govender S, Morgan E, Ramahala R, Graham S
Comput Struct Biotechnol J. 2024; 23:3800-3816.
PMID: 39525081
PMC: 11550722.
DOI: 10.1016/j.csbj.2024.10.031.
Inhibition of the SARS-CoV-2 Non-structural Protein 5 (NSP5) Protease by Nitrosocarbonyl-Bases Small Molecules.
Leusciatti M, Macchi B, Marino-Merlo F, Stefanizzi V, Mastino A, Morra G
ACS Omega. 2024; 9(40):41599-41615.
PMID: 39398138
PMC: 11465462.
DOI: 10.1021/acsomega.4c05480.
3-chymotrypsin-like protease in SARS-CoV-2.
Al Adem K, Ferreira J, Villanueva A, Fadl S, El-Sadaany F, Masmoudi I
Biosci Rep. 2024; 44(8).
PMID: 39036877
PMC: 11300678.
DOI: 10.1042/BSR20231395.
Visualizing the Active Site Oxyanion Loop Transition Upon Ensitrelvir Binding and Transient Dimerization of SARS-CoV-2 Main Protease.
Kovalevsky A, Aniana A, Coates L, Ghirlando R, Nashed N, Louis J
J Mol Biol. 2024; 436(13):168616.
PMID: 38762033
PMC: 11182712.
DOI: 10.1016/j.jmb.2024.168616.
SARS-CoV-2 M Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Chen S, Arutyunova E, Lu J, Khan M, Rut W, Zmudzinski M
ACS Cent Sci. 2023; 9(4):696-708.
PMID: 37122453
PMC: 10042146.
DOI: 10.1021/acscentsci.3c00054.
Stabilization of the Dimeric State of SARS-CoV-2 Main Protease by GC376 and Nirmatrelvir.
Paciaroni A, Libera V, Ripanti F, Orecchini A, Petrillo C, Francisci D
Int J Mol Sci. 2023; 24(7).
PMID: 37047038
PMC: 10093836.
DOI: 10.3390/ijms24076062.
Unveiling mutation effects on the structural dynamics of the main protease from SARS-CoV-2 with hybrid simulation methods.
Gasparini P, Philot E, Pantaleao S, Torres-Bonfim N, Kliousoff A, Quiroz R
J Mol Graph Model. 2023; 121:108443.
PMID: 36870228
PMC: 9945984.
DOI: 10.1016/j.jmgm.2023.108443.
Unmasking the Conformational Stability and Inhibitor Binding to SARS-CoV-2 Main Protease Active Site Mutants and Miniprecursor.
Kovalevsky A, Coates L, Kneller D, Ghirlando R, Aniana A, Nashed N
J Mol Biol. 2022; 434(24):167876.
PMID: 36334779
PMC: 9628131.
DOI: 10.1016/j.jmb.2022.167876.
Exploring the Targets of Novel Corona Virus and Docking-based Screening of Potential Natural Inhibitors to Combat COVID-19.
Dey R, Samadder A, Nandi S
Curr Top Med Chem. 2022; 22(29):2410-2434.
PMID: 36281864
DOI: 10.2174/1568026623666221020163831.
Autoprocessing and oxyanion loop reorganization upon GC373 and nirmatrelvir binding of monomeric SARS-CoV-2 main protease catalytic domain.
Nashed N, Kneller D, Coates L, Ghirlando R, Aniana A, Kovalevsky A
Commun Biol. 2022; 5(1):976.
PMID: 36114420
PMC: 9481597.
DOI: 10.1038/s42003-022-03910-y.
Functional map of SARS-CoV-2 3CL protease reveals tolerant and immutable sites.
Iketani S, Hong S, Sheng J, Bahari F, Culbertson B, Atanaki F
Cell Host Microbe. 2022; 30(10):1354-1362.e6.
PMID: 36029764
PMC: 9365866.
DOI: 10.1016/j.chom.2022.08.003.
NMR Observation of Sulfhydryl Signals in SARS-CoV-2 Main Protease Aids Structural Studies.
Robertson A, Ying J, Bax A
Chembiochem. 2022; 23(19):e202200471.
PMID: 35972230
PMC: 9537880.
DOI: 10.1002/cbic.202200471.
Allosteric Binding Sites of the SARS-CoV-2 Main Protease: Potential Targets for Broad-Spectrum Anti-Coronavirus Agents.
Alzyoud L, Ghattas M, Atatreh N
Drug Des Devel Ther. 2022; 16:2463-2478.
PMID: 35941927
PMC: 9356625.
DOI: 10.2147/DDDT.S370574.
Effect of pH on stability of dimer structure of the main protease of coronavirus-2.
Boonamnaj P, Pandey R, Sompornpisut P
Biophys Chem. 2022; 287:106829.
PMID: 35635893
PMC: 9119281.
DOI: 10.1016/j.bpc.2022.106829.
Gain-of-Signal Assays for Probing Inhibition of SARS-CoV-2 M/3CL in Living Cells.
Moghadasi S, Esler M, Otsuka Y, Becker J, Moraes S, Anderson C
mBio. 2022; 13(3):e0078422.
PMID: 35471084
PMC: 9239272.
DOI: 10.1128/mbio.00784-22.
Progress on SARS-CoV-2 3CLpro Inhibitors: Inspiration from SARS-CoV 3CLpro Peptidomimetics and Small-Molecule Anti-Inflammatory Compounds.
Zhu J, Zhang H, Lin Q, Lyu J, Lu L, Chen H
Drug Des Devel Ther. 2022; 16:1067-1082.
PMID: 35450403
PMC: 9015912.
DOI: 10.2147/DDDT.S359009.