Effector Proteins Exert an Important Influence on the Signaling-active State of the Small GTPase Cdc42
Overview
Affiliations
GTP-binding (G) proteins regulate the flow of information in cellular signaling pathways by alternating between a GTP-bound "active" state and a GDP-bound "inactive" state. Cdc42, a member of the Rho family of Ras-related small G-proteins, plays key roles in the regulation of cell shape, motility, and growth. Here we describe the high resolution x-ray crystal structure for Cdc42 bound to the GTP analog guanylyl beta,gamma-methylene-diphosphonate (GMP-PCP) (i.e. the presumed signaling-active state) and show that it is virtually identical to the structures for the signaling-inactive, GDP-bound form of the protein, contrary to what has been reported for Ras and other G-proteins. Especially surprising was that the GMP-PCP- and GDP-bound forms of Cdc42 did not show detectable differences in their Switch I and Switch II loops. Fluorescence studies using a Cdc42 mutant in which a tryptophan residue was introduced at position 32 of Switch I also showed that there was little difference in the Switch I conformation between the GDP- and GMP-PCP-bound states (i.e. <10%), which again differed from Ras where much larger changes in Trp-32 fluorescence were observed when comparing these two nucleotide-bound states (>30%). However, the binding of an effector protein induced significant changes in the Trp-32 emission specifically from GMP-PCP-bound Cdc42, as well as in the phosphate resonances for GTP bound to this G-protein as indicated in NMR studies. An examination of the available structures for Cdc42 complexed to different effector proteins, versus the x-ray crystal structure for GMP-PCP-bound Cdc42, provides a possible explanation for how effectors can distinguish between the GTP- and GDP-bound forms of this G-protein and ensure that the necessary conformational changes for signal propagation occur.
Structural Dynamics of Rho GTPases.
Lin Y, Zheng Y J Mol Biol. 2024; 437(3):168919.
PMID: 39708912 PMC: 11757035. DOI: 10.1016/j.jmb.2024.168919.
Okoto P, Sonniala S, Sakhel B, Muhoza D, Adams P, Kumar T Methods Mol Biol. 2023; 2652:147-169.
PMID: 37093474 DOI: 10.1007/978-1-0716-3147-8_8.
AlloReverse: multiscale understanding among hierarchical allosteric regulations.
Zha J, Li Q, Liu X, Lin W, Wang T, Wei J Nucleic Acids Res. 2023; 51(W1):W33-W38.
PMID: 37070199 PMC: 10320067. DOI: 10.1093/nar/gkad279.
Lipidation of small GTPase Cdc42 as regulator of its physiological and pathophysiological functions.
Wirth A, Ponimaskin E Front Physiol. 2023; 13:1088840.
PMID: 36699687 PMC: 9868626. DOI: 10.3389/fphys.2022.1088840.
Umarao P, Rath P, Gourinath S Front Genet. 2022; 13:781885.
PMID: 35186026 PMC: 8847673. DOI: 10.3389/fgene.2022.781885.