Lonely Arginine Seeks Friendly Environment

Overview

Journal J Gen Physiol

Specialty Physiology

Date 2007 Jul 20

PMID 17635960

Citations 19

Authors

Benoit Roux

Affiliations

Soon will be listed here.

Citing Articles

Influence of interfacial tryptophan residues on an arginine-flanked transmembrane helix.

Sustich S, Afrose F, Greathouse D, Koeppe 2nd R Biochim Biophys Acta Biomembr. 2019; 1862(2):183134.

PMID: 31738898 PMC: 6943188. DOI: 10.1016/j.bbamem.2019.183134.

Breaking the Backbone: Central Arginine Residues Induce Membrane Exit and Helix Distortions within a Dynamic Membrane Peptide.

McKay M, Fu R, Greathouse D, Koeppe 2nd R J Phys Chem B. 2019; 123(38):8034-8047.

PMID: 31483653 PMC: 6765365. DOI: 10.1021/acs.jpcb.9b06034.

Influence of Lipid Saturation, Hydrophobic Length and Cholesterol on Double-Arginine-Containing Helical Peptides in Bilayer Membranes.

Lipinski K, McKay M, Afrose F, Martfeld A, Koeppe 2nd R, Greathouse D Chembiochem. 2019; 20(21):2784-2792.

PMID: 31150136 PMC: 6829048. DOI: 10.1002/cbic.201900282.

Molecular Dynamics Simulations of Membrane Permeability.

Venable R, Kramer A, Pastor R Chem Rev. 2019; 119(9):5954-5997.

PMID: 30747524 PMC: 6506413. DOI: 10.1021/acs.chemrev.8b00486.

Influence of High pH and Cholesterol on Single Arginine-Containing Transmembrane Peptide Helices.

Thibado J, Martfeld A, Greathouse D, Koeppe 2nd R Biochemistry. 2016; 55(45):6337-6343.

PMID: 27782382 PMC: 5266483. DOI: 10.1021/acs.biochem.6b00896.

References

Laine M, Papazian D, Roux B . Critical assessment of a proposed model of Shaker. FEBS Lett. 2004; 564(3):257-63. DOI: 10.1016/S0014-5793(04)00273-X. View

Laine M, Lin M, Bannister J, Silverman W, Mock A, Roux B . Atomic proximity between S4 segment and pore domain in Shaker potassium channels. Neuron. 2003; 39(3):467-81. DOI: 10.1016/s0896-6273(03)00468-9. View

Wimley W, Creamer T, White S . Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides. Biochemistry. 1996; 35(16):5109-24. DOI: 10.1021/bi9600153. View

Wimley W, White S . Experimentally determined hydrophobicity scale for proteins at membrane interfaces. Nat Struct Biol. 1996; 3(10):842-8. DOI: 10.1038/nsb1096-842. View

Hessa T, Kim H, Bihlmaier K, Lundin C, Boekel J, Andersson H . Recognition of transmembrane helices by the endoplasmic reticulum translocon. Nature. 2005; 433(7024):377-81. DOI: 10.1038/nature03216. View

Mishra V, Palgunachari M, Segrest J, Anantharamaiah G . Interactions of synthetic peptide analogs of the class A amphipathic helix with lipids. Evidence for the snorkel hypothesis. J Biol Chem. 1994; 269(10):7185-91. View

Hessa T, White S, von Heijne G . Membrane insertion of a potassium-channel voltage sensor. Science. 2005; 307(5714):1427. DOI: 10.1126/science.1109176. View

MacKinnon R . Structural biology. Membrane protein insertion and stability. Science. 2005; 307(5714):1425-6. DOI: 10.1126/science.1110525. View

Shirts M, Pande V . Solvation free energies of amino acid side chain analogs for common molecular mechanics water models. J Chem Phys. 2005; 122(13):134508. DOI: 10.1063/1.1877132. View

10.

Long S, Campbell E, MacKinnon R . Crystal structure of a mammalian voltage-dependent Shaker family K+ channel. Science. 2005; 309(5736):897-903. DOI: 10.1126/science.1116269. View

11.

Freites J, Tobias D, von Heijne G, White S . Interface connections of a transmembrane voltage sensor. Proc Natl Acad Sci U S A. 2005; 102(42):15059-64. PMC: 1250233. DOI: 10.1073/pnas.0507618102. View

12.

Chavan M, Lennarz W . The molecular basis of coupling of translocation and N-glycosylation. Trends Biochem Sci. 2005; 31(1):17-20. DOI: 10.1016/j.tibs.2005.11.010. View

13.

Treptow W, Tarek M . Environment of the gating charges in the Kv1.2 Shaker potassium channel. Biophys J. 2006; 90(9):L64-6. PMC: 1432113. DOI: 10.1529/biophysj.106.080754. View

14.

Shental-Bechor D, Fleishman S, Ben-Tal N . Has the code for protein translocation been broken?. Trends Biochem Sci. 2006; 31(4):192-6. DOI: 10.1016/j.tibs.2006.02.002. View

15.

Bond P, Sansom M . Bilayer deformation by the Kv channel voltage sensor domain revealed by self-assembly simulations. Proc Natl Acad Sci U S A. 2007; 104(8):2631-6. PMC: 1797625. DOI: 10.1073/pnas.0606822104. View

16.

Dorairaj S, Allen T . On the thermodynamic stability of a charged arginine side chain in a transmembrane helix. Proc Natl Acad Sci U S A. 2007; 104(12):4943-8. PMC: 1829244. DOI: 10.1073/pnas.0610470104. View

17.

White S . Membrane protein insertion: the biology-physics nexus. J Gen Physiol. 2007; 129(5):363-9. PMC: 2154380. DOI: 10.1085/jgp.200709741. View

18.

Wolfenden R . Experimental measures of amino acid hydrophobicity and the topology of transmembrane and globular proteins. J Gen Physiol. 2007; 129(5):357-62. PMC: 2154378. DOI: 10.1085/jgp.200709743. View

19.

MacCallum J, Bennett W, Tieleman D . Partitioning of amino acid side chains into lipid bilayers: results from computer simulations and comparison to experiment. J Gen Physiol. 2007; 129(5):371-7. PMC: 2154372. DOI: 10.1085/jgp.200709745. View

20.

Campos F, Chanda B, Roux B, Bezanilla F . Two atomic constraints unambiguously position the S4 segment relative to S1 and S2 segments in the closed state of Shaker K channel. Proc Natl Acad Sci U S A. 2007; 104(19):7904-9. PMC: 1876545. DOI: 10.1073/pnas.0702638104. View