Structures of Activated Fructose-1,6-bisphosphatase from Escherichia Coli. Coordinate Regulation of Bacterial Metabolism and the Conservation of the R-state
Overview
Affiliations
The enteric bacterium Escherichia coli requires fructose-1,6-bisphosphatase (FBPase) for growth on gluconeogenic carbon sources. Constitutive expression of FBPase and fructose-6-phosphate-1-kinase coupled with the absence of futile cycling implies an undetermined mechanism of coordinate regulation involving both enzymes. Tricarboxylic acids and phosphorylated three-carbon carboxylic acids, all intermediates of glycolysis and the tricarboxylic acid cycle, are shown here to activate E. coli FBPase. The two most potent activators, phosphoenolpyruvate and citrate, bind to the sulfate anion site, revealed previously in the first crystal structure of the E. coli enzyme. Tetramers ligated with either phosphoenolpyruvate or citrate, in contrast to the sulfate-bound structure, are in the canonical R-state of porcine FBPase but nevertheless retain sterically blocked AMP pockets. At physiologically relevant concentrations, phosphoenolpyruvate and citrate stabilize an active tetramer over a less active enzyme form of mass comparable with that of a dimer. The above implies the conservation of the R-state through evolution. FBPases of heterotrophic organisms of distantly related phylogenetic groups retain residues of the allosteric activator site and in those instances where data are available exhibit activation by phosphoenolpyruvate. Findings here unify disparate observations regarding bacterial FBPases, implicating a mechanism of feed-forward activation in bacterial central metabolism.
Citric Acid: A Nexus Between Cellular Mechanisms and Biomaterial Innovations.
Xu H, Yan S, Gerhard E, Xie D, Liu X, Zhang B Adv Mater. 2024; 36(32):e2402871.
PMID: 38801111 PMC: 11309907. DOI: 10.1002/adma.202402871.
Remodeling of Carbon Metabolism during Sulfoglycolysis in Escherichia coli.
Mui J, de Souza D, Saunders E, McConville M, Williams S Appl Environ Microbiol. 2023; 89(2):e0201622.
PMID: 36728421 PMC: 9972972. DOI: 10.1128/aem.02016-22.
Crystallization and structure of ebselen bound to Cys141 of human inositol monophosphatase.
Fenn G, Waller-Evans H, Atack J, Bax B Acta Crystallogr F Struct Biol Commun. 2020; 76(Pt 10):469-476.
PMID: 33006574 PMC: 7531247. DOI: 10.1107/S2053230X20011310.
Toward a genome scale sequence specific dynamic model of cell-free protein synthesis in .
Horvath N, Vilkhovoy M, Wayman J, Calhoun K, Swartz J, Varner J Metab Eng Commun. 2020; 10:e00113.
PMID: 32280586 PMC: 7136494. DOI: 10.1016/j.mec.2019.e00113.
Wolf N, Gutka H, Movahedzadeh F, Abad-Zapatero C Acta Crystallogr D Struct Biol. 2018; 74(Pt 4):321-331.
PMID: 29652259 PMC: 5892879. DOI: 10.1107/S2059798318002838.