Szafran K, Rafalski D, Skowronek K, Wojciechowski M, Kazrani A, Gilski M
Nucleic Acids Res. 2024; 52(15):9103-9118.
PMID: 39041409
PMC: 11347163.
DOI: 10.1093/nar/gkae634.
Hasani S, Ghafouri E, Kouhpayeh S, Amerizadeh F, Rahimmanesh I, Amirkhani Z
Heliyon. 2023; 9(9):e19925.
PMID: 37809683
PMC: 10559356.
DOI: 10.1016/j.heliyon.2023.e19925.
Wang S, Sun E, Liu Y, Yin B, Zhang X, Li M
J Virol. 2023; 97(6):e0059923.
PMID: 37306585
PMC: 10308915.
DOI: 10.1128/jvi.00599-23.
Enam S, Cherry J, Leonard S, Zheludev I, Lipman D, Fire A
Appl Environ Microbiol. 2022; 89(1):e0167022.
PMID: 36519847
PMC: 9888230.
DOI: 10.1128/aem.01670-22.
Chen T, Chang W
Proc Natl Acad Sci U S A. 2021; 118(28).
PMID: 34215668
PMC: 8285969.
DOI: 10.1073/pnas.2109992118.
Overcoming conservation in TALE-DNA interactions: a minimal repeat scaffold enables selective recognition of an oxidized 5-methylcytosine.
Maurer S, Buchmuller B, Ehrt C, Jasper J, Koch O, Summerer D
Chem Sci. 2018; 9(36):7247-7252.
PMID: 30288245
PMC: 6148557.
DOI: 10.1039/c8sc01958d.
Tet-Assisted Bisulfite Sequencing (TAB-seq).
Yu M, Han D, Hon G, He C
Methods Mol Biol. 2017; 1708:645-663.
PMID: 29224168
PMC: 6606048.
DOI: 10.1007/978-1-4939-7481-8_33.
Replacement of 2'-Deoxycytidine by 2'-Deoxycytidine Analogues in the E. coli Genome.
Mehta A, Li H, Reed S, Supekova L, Javahishvili T, Schultz P
J Am Chem Soc. 2016; 138(43):14230-14233.
PMID: 27762133
PMC: 5134732.
DOI: 10.1021/jacs.6b09661.
Molecular Basis for Lytic Bacteriophage Resistance in Enterococci.
Duerkop B, Huo W, Bhardwaj P, Palmer K, Hooper L
mBio. 2016; 7(4).
PMID: 27578757
PMC: 4999554.
DOI: 10.1128/mBio.01304-16.
Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9.
Bryson A, Hwang Y, Sherrill-Mix S, Wu G, Lewis J, Black L
mBio. 2015; 6(3):e00648.
PMID: 26081634
PMC: 4471564.
DOI: 10.1128/mBio.00648-15.
Detection of mismatched 5-hydroxymethyluracil in DNA by selective chemical labeling.
Yu M, Song C, He C
Methods. 2014; 72:16-20.
PMID: 25462560
PMC: 4300242.
DOI: 10.1016/j.ymeth.2014.11.007.
Identification of the glucosyltransferase that converts hydroxymethyluracil to base J in the trypanosomatid genome.
Bullard W, Lopes da Rosa-Spiegler J, Liu S, Wang Y, Sabatini R
J Biol Chem. 2014; 289(29):20273-82.
PMID: 24891501
PMC: 4106341.
DOI: 10.1074/jbc.M114.579821.
Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine.
Yu M, Hon G, Szulwach K, Song C, Jin P, Ren B
Nat Protoc. 2012; 7(12):2159-70.
PMID: 23196972
PMC: 3641661.
DOI: 10.1038/nprot.2012.137.
Mapping recently identified nucleotide variants in the genome and transcriptome.
Song C, Yi C, He C
Nat Biotechnol. 2012; 30(11):1107-16.
PMID: 23138310
PMC: 3537840.
DOI: 10.1038/nbt.2398.
5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary.
Khare T, Pai S, Koncevicius K, Pal M, Kriukiene E, Liutkeviciute Z
Nat Struct Mol Biol. 2012; 19(10):1037-43.
PMID: 22961382
PMC: 3465469.
DOI: 10.1038/nsmb.2372.
Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes.
Terragni J, Bitinaite J, Zheng Y, Pradhan S
Biochemistry. 2012; 51(5):1009-19.
PMID: 22229759
PMC: 3273966.
DOI: 10.1021/bi2014739.
Bioorthogonal labeling of 5-hydroxymethylcytosine in genomic DNA and diazirine-based DNA photo-cross-linking probes.
Song C, He C
Acc Chem Res. 2011; 44(9):709-17.
PMID: 21539303
PMC: 3646476.
DOI: 10.1021/ar2000502.
Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine.
Song C, Szulwach K, Fu Y, Dai Q, Yi C, Li X
Nat Biotechnol. 2010; 29(1):68-72.
PMID: 21151123
PMC: 3107705.
DOI: 10.1038/nbt.1732.
Nucleoside diphosphate sugars and saccharide synthesis. The fourth Hopkins Memorial Lecture.
LELOIR L
Biochem J. 1964; 91(1):1.b2-8.
PMID: 16749053
PMC: 1202807.
GLUCOSYLATED NUCLEOTIDE SEQUENCES FROM T-EVEN BACTERIOPHAGE DEOXYRIBONUCLEIC ACIDS.
LUNT M, NEWTON E
Biochem J. 1965; 95:717-23.
PMID: 14342507
PMC: 1206798.
DOI: 10.1042/bj0950717.