Zachary A Martinez
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Explore the profile of Zachary A Martinez including associated specialties, affiliations and a list of published articles.
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3
Citations
24
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Recent Articles
1.
Mall R, Kaushik R, Martinez Z, Thomson M, Castiglione F
Sci Rep
. 2025 Jan;
15(1):2381.
PMID: 39827171
The problem of protein structure determination is usually solved by X-ray crystallography. Several in silico deep learning methods have been developed to overcome the high attrition rate, cost of experiments...
2.
Subramanian A, Martinez Z, Lourenco A, Liu S, Thomson M
bioRxiv
. 2024 Jan;
PMID: 38187750
The combinatorial scale of amino-acid sequence-space has traditionally precluded substantive study of the full protein sequence-structure map. It remains unknown, for instance, how much of the vast uncharted landscape of...
3.
Martinez Z, Murray R, Thomson M
bioRxiv
. 2023 Nov;
PMID: 37986952
Deep-learning models have been rapidly adopted by many fields, partly due to the deluge of data humanity has amassed. In particular, the petabases of biological sequencing data enable the unsupervised...
4.
Kirchberger P, Martinez Z, Ochman H
mBio
. 2022 May;
13(3):e0058822.
PMID: 35491833
Microviruses encompass an astonishing array of small, single-stranded DNA phages that, due to the surge in metagenomic surveys, are now known to be prevalent in most environments. Current taxonomy concedes...
5.
Kirchberger P, Martinez Z, Luker L, Ochman H
Proc Natl Acad Sci U S A
. 2021 Jul;
118(28).
PMID: 34244443
Single-stranded DNA phages of the family have fundamentally different evolutionary origins and dynamics than the more frequently studied double-stranded DNA phages. Despite their small size (around 5 kb), which imposes...