Yashvardhan Jain
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Explore the profile of Yashvardhan Jain including associated specialties, affiliations and a list of published articles.
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8
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10
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Recent Articles
1.
Borner K, Blood P, Silverstein J, Ruffalo M, Satija R, Teichmann S, et al.
Nat Methods
. 2025 Mar;
PMID: 40082611
The Human BioMolecular Atlas Program (HuBMAP) aims to construct a 3D Human Reference Atlas (HRA) of the healthy adult body. Experts from 20+ consortia collaborate to develop a Common Coordinate...
2.
Wang X, Dilip R, Bussi Y, Brown C, Pradhan E, Jain Y, et al.
bioRxiv
. 2024 Nov;
PMID: 39605651
We present a novel approach to cell phenotyping for spatial proteomics that addresses the challenge of generalization across diverse datasets with varying marker panels. Our approach utilizes a transformer with...
3.
Yagis E, Aslani S, Jain Y, Zhou Y, Rahmani S, Brunet J, et al.
Sci Rep
. 2024 Nov;
14(1):27258.
PMID: 39516256
Automated blood vessel segmentation is critical for biomedical image analysis, as vessel morphology changes are associated with numerous pathologies. Still, precise segmentation is difficult due to the complexity of vascular...
4.
Jain Y, Walsh C, Yagis E, Aslani S, Nandanwar S, Zhou Y, et al.
bioRxiv
. 2024 Sep;
PMID: 39253466
Efficient algorithms are needed to segment vasculature in new three-dimensional (3D) medical imaging datasets at scale for a wide range of research and clinical applications. Manual segmentation of vessels in...
5.
Yagis E, Aslani S, Jain Y, Zhou Y, Rahmani S, Brunet J, et al.
Res Sq
. 2024 Jul;
PMID: 39070623
Automated blood vessel segmentation is critical for biomedical image analysis, as vessel morphology changes are associated with numerous pathologies. Still, precise segmentation is difficult due to the complexity of vascular...
6.
Borner K, Blood P, Silverstein J, Ruffalo M, Satija R, Teichmann S, et al.
bioRxiv
. 2024 Jun;
PMID: 38826261
The Human BioMolecular Atlas Program (HuBMAP) aims to construct a reference 3D structural, cellular, and molecular atlas of the healthy adult human body. The HuBMAP Data Portal (https://portal.hubmapconsortium.org) serves experimental...
7.
Jain Y, Godwin L, Joshi S, Mandarapu S, Le T, Lindskog C, et al.
Nat Commun
. 2023 Aug;
14(1):4656.
PMID: 37537179
The development of a reference atlas of the healthy human body requires automated image segmentation of major anatomical structures across multiple organs based on spatial bioimages generated from various sources...
8.
Jain Y, Godwin L, Ju Y, Sood N, Quardokus E, Bueckle A, et al.
Commun Biol
. 2023 Jul;
6(1):717.
PMID: 37468557
The Human BioMolecular Atlas Program (HuBMAP) aims to compile a Human Reference Atlas (HRA) for the healthy adult body at the cellular level. Functional tissue units (FTUs), relevant for HRA...
9.
Jain Y, Godwin L, Joshi S, Mandarapu S, Le T, Lindskog C, et al.
bioRxiv
. 2023 Jan;
PMID: 36711953
The development of a reference atlas of the healthy human body requires automated image segmentation of major anatomical structures across multiple organs based on spatial bioimages generated from various sources...