Wilfred W Li
Overview
Explore the profile of Wilfred W Li including associated specialties, affiliations and a list of published articles.
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17
Citations
6972
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Recent Articles
1.
Molecular dynamics analysis of antibody recognition and escape by human H1N1 influenza hemagglutinin
Ieong P, Amaro R, Li W
Biophys J
. 2015 Jun;
108(11):2704-12.
PMID: 26039171
The antibody immunoglobulin (Ig) 2D1 is effective against the 1918 hemagglutinin (HA) and also known to cross-neutralize the 2009 pandemic H1N1 influenza HA through a similar epitope. However, the detailed...
2.
Amaro R, Li W
Methods Mol Biol
. 2011 Dec;
819:575-94.
PMID: 22183559
Computational simulation of pandemic diseases provides important insight into many disease features that may benefit public health. This is especially true for the influenza virus, a continuing global pandemic threat....
3.
Amaro R, Swift R, Votapka L, Li W, Walker R, Bush R
Nat Commun
. 2011 Jul;
2:388.
PMID: 21750542
The recently discovered 150-cavity in the active site of group-1 influenza A neuraminidase (NA) proteins provides a target for rational structure-based drug development to counter the increasing frequency of antiviral...
4.
Unni S, Huang Y, Hanson R, Tobias M, Krishnan S, Li W, et al.
J Comput Chem
. 2011 Mar;
32(7):1488-91.
PMID: 21425296
APBS and PDB2PQR are widely utilized free software packages for biomolecular electrostatics calculations. Using the Opal toolkit, we have developed a Web services framework for these software packages that enables...
5.
Ren J, Williams N, Clementi L, Krishnan S, Li W
Nucleic Acids Res
. 2010 Jun;
38(Web Server issue):W724-31.
PMID: 20529877
Biomedical applications have become increasingly complex, and they often require large-scale high-performance computing resources with a large number of processors and memory. The complexity of application deployment and the advances...
6.
Ren J, Xie L, Li W, Bourne P
Nucleic Acids Res
. 2010 May;
38(Web Server issue):W441-4.
PMID: 20484373
The proteome-wide characterization and analysis of protein ligand-binding sites and their interactions with ligands can provide pivotal information in understanding the structure, function and evolution of proteins and for designing...
7.
Sung J, Van Wynsberghe A, Amaro R, Li W, McCammon J
J Am Chem Soc
. 2010 Feb;
132(9):2883-5.
PMID: 20155919
Within influenza viral particles, the intricate balance between host cell binding and sialic acid receptor destruction is carefully maintained by the hemagglutinin (HA) and neuraminidase (NA) glycoproteins, respectively. A major...
8.
Amaro R, Li W
Curr Top Med Chem
. 2009 Nov;
10(1):3-13.
PMID: 19929833
Ensemble based virtual screening refers to the use of conformational ensembles from crystal structures, NMR studies or molecular dynamics simulations. It has gained greater acceptance as advances in the theoretical...
9.
Newhouse E, Xu D, Markwick P, Amaro R, Pao H, Wu K, et al.
J Am Chem Soc
. 2009 Nov;
131(47):17430-42.
PMID: 19891427
Hemagglutinins (HA's) from duck, swine, and human influenza viruses have previously been shown to prefer avian and human glycan receptor analogues with distinct topological profiles, pentasaccharides LSTa (alpha-2,3 linkage) and...
10.
Bailey T, Boden M, Buske F, Frith M, Grant C, Clementi L, et al.
Nucleic Acids Res
. 2009 May;
37(Web Server issue):W202-8.
PMID: 19458158
The MEME Suite web server provides a unified portal for online discovery and analysis of sequence motifs representing features such as DNA binding sites and protein interaction domains. The popular...