Vignesh Shanmugam
Overview
Explore the profile of Vignesh Shanmugam including associated specialties, affiliations and a list of published articles.
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Citations
402
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Recent Articles
11.
Shaban M, Bai Y, Qiu H, Mao S, Yeung J, Yeo Y, et al.
bioRxiv
. 2023 Jul;
PMID: 37425872
Highly multiplexed protein imaging is emerging as a potent technique for analyzing protein distribution within cells and tissues in their native context. However, existing cell annotation methods utilizing high-plex spatial...
12.
Griffin G, Booth C, Togami K, Chung S, Ssozi D, Verga J, et al.
Nature
. 2023 Jun;
618(7966):834-841.
PMID: 37286599
Tumours most often arise from progression of precursor clones within a single anatomical niche. In the bone marrow, clonal progenitors can undergo malignant transformation to acute leukaemia, or differentiate into...
13.
Smith R, Nabel Smith K, Shanmugam V, Beltran L
Skeletal Radiol
. 2023 Apr;
52(9):1799-1800.
PMID: 37099069
No abstract available.
14.
Smith R, Nabel Smith K, Shanmugam V, Beltran L
Skeletal Radiol
. 2023 Apr;
52(9):1777-1779.
PMID: 37071190
No abstract available.
15.
Russell A, Weir J, Nadaf N, Shabet M, Kumar V, Kambhampati S, et al.
bioRxiv
. 2023 Apr;
PMID: 37066158
Recent technological innovations have enabled the high-throughput quantification of gene expression and epigenetic regulation within individual cells, transforming our understanding of how complex tissues are constructed. Missing from these measurements,...
16.
Liu S, Iorgulescu J, Li S, Borji M, Barrera-Lopez I, Shanmugam V, et al.
Immunity
. 2022 Oct;
55(10):1940-1952.e5.
PMID: 36223726
T cells mediate antigen-specific immune responses to disease through the specificity and diversity of their clonotypic T cell receptors (TCRs). Determining the spatial distributions of T cell clonotypes in tissues...
17.
Cable D, Murray E, Shanmugam V, Zhang S, Zou L, Diao M, et al.
Nat Methods
. 2022 Sep;
19(9):1076-1087.
PMID: 36050488
A central problem in spatial transcriptomics is detecting differentially expressed (DE) genes within cell types across tissue context. Challenges to learning DE include changing cell type composition across space and...
18.
Larocca C, Shanmugam V, Zemmour D, Antin J, Lane A
Am J Dermatopathol
. 2022 Jun;
44(12):929-932.
PMID: 35642960
No abstract available.
19.
Lee K, Evans M, Yang L, Ng S, Snowden C, Khodadoust M, et al.
Blood
. 2021 Aug;
138(23):2435-2440.
PMID: 34432866
No abstract available.
20.
Sewastianik T, Straubhaar J, Zhao J, Samur M, Adler K, Tanton H, et al.
Blood
. 2021 Mar;
137(14):1905-1919.
PMID: 33751108
Chromosome 13q deletion [del(13q)], harboring the miR-15a/16-1 cluster, is one of the most common genetic alterations in mature B-cell malignancies, which originate from germinal center (GC) and post-GC B cells....