Urszula Czerwinska
Overview
Explore the profile of Urszula Czerwinska including associated specialties, affiliations and a list of published articles.
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9
Citations
232
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Recent Articles
1.
Zinovyev A, Czerwinska U, Cantini L, Barillot E, Frahm K, Shepelyansky D
PLoS Comput Biol
. 2020 Feb;
16(2):e1007652.
PMID: 32069277
English Wikipedia, containing more than five millions articles, has approximately eleven thousands web pages devoted to proteins or genes most of which were generated by the Gene Wiki project. These...
2.
Kondratova M, Czerwinska U, Sompairac N, Amigorena S, Soumelis V, Barillot E, et al.
Nat Commun
. 2019 Oct;
10(1):4808.
PMID: 31641119
The lack of integrated resources depicting the complexity of the innate immune response in cancer represents a bottleneck for high-throughput data interpretation. To address this challenge, we perform a systematic...
3.
Nazarov P, Wienecke-Baldacchino A, Zinovyev A, Czerwinska U, Muller A, Nashan D, et al.
BMC Med Genomics
. 2019 Sep;
12(1):132.
PMID: 31533822
Background: The amount of publicly available cancer-related "omics" data is constantly growing and can potentially be used to gain insights into the tumour biology of new cancer patients, their diagnosis...
4.
Sompairac N, Nazarov P, Czerwinska U, Cantini L, Biton A, Molkenov A, et al.
Int J Mol Sci
. 2019 Sep;
20(18).
PMID: 31500324
Independent component analysis (ICA) is a matrix factorization approach where the signals captured by each individual matrix factors are optimized to become as mutually independent as possible. Initially suggested for...
5.
Michea P, Noel F, Zakine E, Czerwinska U, Sirven P, Abouzid O, et al.
Nat Immunol
. 2018 Jul;
19(8):885-897.
PMID: 30013147
The functions and transcriptional profiles of dendritic cells (DCs) result from the interplay between ontogeny and tissue imprinting. How tumors shape human DCs is unknown. Here we used RNA-based next-generation...
6.
Nikolayeva I, Bost P, Casademont I, Duong V, Koeth F, Prot M, et al.
J Infect Dis
. 2018 Mar;
217(11):1690-1698.
PMID: 29490079
Background: Early detection of severe dengue can improve patient care and survival. To date, no reliable single-gene biomarker exists. We hypothesized that robust multigene signatures exist. Methods: We performed a...
7.
Kairov U, Cantini L, Greco A, Molkenov A, Czerwinska U, Barillot E, et al.
BMC Genomics
. 2017 Sep;
18(1):712.
PMID: 28893186
Background: Independent Component Analysis (ICA) is a method that models gene expression data as an action of a set of statistically independent hidden factors. The output of ICA depends on...
8.
Naldi A, Larive R, Czerwinska U, Urbach S, Montcourrier P, Roy C, et al.
PLoS Comput Biol
. 2017 Mar;
13(3):e1005432.
PMID: 28306714
The ability to build in-depth cell signaling networks from vast experimental data is a key objective of computational biology. The spleen tyrosine kinase (Syk) protein, a well-characterized key player in...
9.
Czerwinska U, Calzone L, Barillot E, Zinovyev A
BMC Syst Biol
. 2015 Aug;
9:46.
PMID: 26271256
Background: Visualization and analysis of molecular profiling data together with biological networks are able to provide new mechanistic insights into biological functions. Currently, it is possible to visualize high-throughput data...