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Tytus D Mak

Explore the profile of Tytus D Mak including associated specialties, affiliations and a list of published articles. Areas
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Articles 29
Citations 579
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Recent Articles
1.
McGlynn D, Yee L, Garraffo H, Geer L, Mak T, Mirokhin Y, et al.
J Am Soc Mass Spectrom . 2025 Jan; 36(2):389-399. PMID: 39806561
While gas chromatography mass spectrometry (GC-MS) has long been used to identify compounds in complex mixtures, this process is often subjective and time-consuming and leaves a large fraction of seemingly...
2.
Simon-Manso Y, Erisman E, Mak T, Burke M, Zuber A, Yang X, et al.
J Am Soc Mass Spectrom . 2025 Jan; 36(2):439-445. PMID: 39752563
The Mass Spectrometry Data Center (MSDC) has recently started improving existing libraries and creating new ones for identifying and analyzing plastics-related compounds (PRC) and materials (PRM) as part of the...
3.
Bushuiev R, Bushuiev A, de Jonge N, Young A, Kretschmer F, Samusevich R, et al.
ArXiv . 2024 Nov; PMID: 39575121
The discovery and identification of molecules in biological and environmental samples is crucial for advancing biomedical and chemical sciences. Tandem mass spectrometry (MS/MS) is the leading technique for high-throughput elucidation...
4.
Klein J, Lam H, Mak T, Bittremieux W, Perez-Riverol Y, Gabriels R, et al.
Anal Chem . 2024 Nov; 96(46):18491-18501. PMID: 39514576
Mass spectral libraries are collections of reference spectra, usually associated with specific analytes from which the spectra were generated, that are used for further downstream analysis of new spectra. There...
5.
Remoroza C, Burke M, Mak T, Sheetlin S, Mirokhin Y, Cooper B, et al.
J Proteome Res . 2024 Mar; 23(4):1443-1457. PMID: 38450643
We report the comparison of mass-spectral-based abundances of tryptic glycopeptides to fluorescence abundances of released labeled glycans and the effects of mass and charge state and in-source fragmentation on glycopeptide...
6.
Geer L, Lapin J, Slotta D, Mak T, Stein S
J Proteome Res . 2023 May; 22(7):2246-2255. PMID: 37232537
The unbounded permutations of biological molecules, including proteins and their constituent peptides, present a dilemma in identifying the components of complex biosamples. Sequence search algorithms used to identify peptide spectra...
7.
Deutsch E, Vizcaino J, Jones A, Binz P, Lam H, Klein J, et al.
J Proteome Res . 2023 Jan; 22(2):287-301. PMID: 36626722
The Human Proteome Organization (HUPO) Proteomics Standards Initiative (PSI) has been successfully developing guidelines, data formats, and controlled vocabularies (CVs) for the proteomics community and other fields supported by mass...
8.
Schugar R, Gliniak C, Osborn L, Massey W, Sangwan N, Horak A, et al.
Elife . 2022 Jan; 11. PMID: 35072627
Obesity has repeatedly been linked to reorganization of the gut microbiome, yet to this point obesity therapeutics have been targeted exclusively toward the human host. Here, we show that gut...
9.
Osborn L, Orabi D, Goudzari M, Sangwan N, Banerjee R, Brown A, et al.
Immunometabolism . 2021 Nov; 3(4). PMID: 34804604
Background: A major contributor to cardiometabolic disease is caloric excess, often a result of consuming low cost, high calorie fast food. Studies have demonstrated the pivotal role of gut microbes...
10.
Deutsch E, Perez-Riverol Y, Carver J, Kawano S, Mendoza L, Van Den Bossche T, et al.
Nat Methods . 2021 Jun; 18(7):768-770. PMID: 34183830
Mass spectra provide the ultimate evidence to support the findings of mass spectrometry proteomics studies in publications, and it is therefore crucial to be able to trace the conclusions back...