Sylke Winkler
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Explore the profile of Sylke Winkler including associated specialties, affiliations and a list of published articles.
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Recent Articles
1.
Bein B, Chrysostomakis I, Arantes L, Brown T, Gerheim C, Schell T, et al.
Genome Biol
. 2025 Feb;
26(1):25.
PMID: 39930463
Museum collections harbor millions of samples, largely unutilized for long-read sequencing. Here, we use ethanol-preserved samples containing kilobase-sized DNA to show that amplification-free protocols can yield contiguous genome assemblies. Additionally,...
2.
Morales A, Dong Y, Brown T, Baid K, Kontopoulos D, Gonzalez V, et al.
Nature
. 2025 Jan;
638(8050):449-458.
PMID: 39880942
Zoonoses are infectious diseases transmitted from animals to humans. Bats have been suggested to harbour more zoonotic viruses than any other mammalian order. Infections in bats are largely asymptomatic, indicating...
3.
Oriowo T, Chrysostomakis I, Martin S, Kukowka S, Brown T, Winkler S, et al.
Gigascience
. 2025 Jan;
14.
PMID: 39877992
Background: In this study, we present an in-depth analysis of the Eurasian minnow (Phoxinus phoxinus) genome, highlighting its genetic diversity, structural variations, and evolutionary adaptations. We generated an annotated haplotype-phased,...
4.
Mc Cartney A, Formenti G, Mouton A, De Panis D, Marins L, Leitao H, et al.
NPJ Biodivers
. 2024 Oct;
3(1):31.
PMID: 39407030
No abstract available.
5.
Bein B, Chrysostomakis I, Arantes L, Brown T, Gerheim C, Schell T, et al.
bioRxiv
. 2024 Oct;
PMID: 39386456
Museum collections harbor millions of samples, largely unutilized for long-read sequencing. Here, we use ethanol-preserved samples containing kilobase-sized DNA to show that amplification-free protocols can yield contiguous genome assemblies. Additionally,...
6.
Ivankovic M, Brand J, Pandolfini L, Brown T, Pippel M, Rozanski A, et al.
Nat Commun
. 2024 Sep;
15(1):8215.
PMID: 39294119
The planarian Schmidtea mediterranea is being studied as a model species for regeneration, but the assembly of planarian genomes remains challenging. Here, we report a high-quality haplotype-phased, chromosome-scale genome assembly...
7.
Mc Cartney A, Formenti G, Mouton A, De Panis D, Marins L, Leitao H, et al.
NPJ Biodivers
. 2024 Sep;
3(1):28.
PMID: 39289538
A genomic database of all Earth's eukaryotic species could contribute to many scientific discoveries; however, only a tiny fraction of species have genomic information available. In 2018, scientists across the...
8.
Marques J, Alves P, Amorim I, Lopes R, Moura M, Myers E, et al.
NPJ Biodivers
. 2024 Sep;
3(1):27.
PMID: 39289491
No abstract available.
9.
Schartl M, Woltering J, Irisarri I, Du K, Kneitz S, Pippel M, et al.
Nature
. 2024 Aug;
634(8032):96-103.
PMID: 39143221
The genomes of living lungfishes can inform on the molecular-developmental basis of the Devonian sarcopterygian fish-tetrapod transition. We de novo sequenced the genomes of the African (Protopterus annectens) and South...
10.
Mutemi K, Simakov O, Pan L, Santangeli L, Null R, Handberg-Thorsager M, et al.
bioRxiv
. 2024 Jul;
PMID: 38948846
The marine annelid is a model organism used in many research areas including evolution and development, neurobiology, ecology and regeneration. Here we present the genomes of (laboratory culture reference and...